|   |
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | G | A | G | L | P | V | S | E | A | T | G | S | M | V | V | D | I | G | G | G | T | T | E | V | A | V | I | S | L | N | G | V | V | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | S | S | V | R | I | G | G | D | R | F | D | E | A | I | I | N | Y | V | R | R | N | Y | G | S | L | I | G | E | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|   |
| . |
|   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|   |
|
|
|
|   |
|
|
|   |   |
|   |   |
|   |   |   | . | . | . | . | . | . | . |   |   |   |
|   |   |
Template Sequence |   |
A | A | L | M | L | G | K | P | A | E | E | T | K | I | I | T | C | H | L | G | N | G | S | S | . |
I | T | A | V | E | G | G | K | S | V | E | T | S | M | G | F | T | P | L | E | G | L | A | M | G | T | R | C | G | S | I | D | P | A | I | V | P | F | L | M | E | K | . |
. |
. |
. |
. |
. |
. |
E | G | L | T | T | R |
Template Known Secondary structure |   |
 |  |  |  |  | T | S |
| G | G | G |
|  |  |  |  |  |  |  | S | S | S |  |  | . |  |  |  |  |  | T | T |  |  |  |  |  | S |
|
| S | S | T | T | S | S | S |
|
| S | S |
|
|
| S |
|
| T | T |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  | T |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  | . |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | |
. | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 260 | . | . |
  |
  |   |
214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | A | E | R | I | K | H | E | I | G | S | A | Y | P | G | D | E | V | R | E | I | E | V | R | G | R | N | L | A | E | G | V | P | R | G | F | T | L | N | S | N | E | I | L | E | A | L | Q | E | P | L | T | G | I | V | S | A | V | M | V | A | L | E | Q | C | P | P | E | L | A | S | D | I | S | E | R | G | M | V | L |
Query Conservation |   |
  |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |
|   |
|   |
|
|
|   |   |   |   |   |   |
|
| . | . | . | . | . | . | . |   |   |
|   |
|
|   |
|   |
|   |
|   |
|   |
|   |
|
|
|   |   |
|   |
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Sequence |   |
E | I | D | T | L | M | N | K | K | S | G | V | L | G | V | S | G | L | S | N | D | F | R | D | L | D | E | A | A | S | K | G | N | . |
. |
. |
. |
. |
. |
. |
R | K | A | E | L | A | L | E | I | F | A | Y | K | V | K | K | F | I | G | E | Y | S | A | V | L | N | G | . |
. |
. |
. |
. |
. |
. |
A | D | A | V | V | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  | S | S |
| S |
|  |  |  |  |  |  |  |  |  | T | T |
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | . | . | . | . | . | . | . |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
263 | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . |
  |
  |   |
294 | . | . | . | . | |
. | 300 | . | . | . | . | . | . | . | . | . | 310 | . | |
|
|
. | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | G | G | G | A | . |
L | L | R | N | L | D | R | L | L | M | E | E | T | . |
. |
. |
G | I | P | V | V | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | E | D | P | L | T | C | V | A | R | G | G | G | K | A | L | E | M |
Query Conservation |   |
  |
|
|   |
| . |   |   |
|   |
|   |   |   |
|   |   |   |   | . | . | . |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|
|
|   |
|
|
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   |
|   |
|
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
T | A | G | I | G | E | N | S | A | S | I | R | K | R | I | L | T | G | L | D | G | I | G | I | K | I | D | D | E | K | N | K | I | R | G | Q | E | I | D | I | S | T | P | D | A | K | V | R | V | F | V | I | P | T | N | E | E | L | A | I | A | R | E | T | K | E | I | V | E | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  | T | T |
| G | G | G | T | B |
| B |
| T | T | G | G | G |
|
| S |
|
|  |  |
| B |
| T | T |
| S | B |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
329 | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . |
  |