Job Description P15031 Confidence 96.01% Date Thu Jan 5 11:34:16 GMT 2012 Rank 325 Aligned Residues 124 % Identity 21% Template c3io5B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:recombination and repair protein; PDBTitle: crystal structure of a dimeric form of the uvsx recombinase core2 domain from enterobacteria phage t4 Resolution 2.40 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	G	K	I	T	A	L	I	G	P	N	G	C	G	K	S	T	L	L	N	C	F	S	R	L	L	M	P	Q	S	G	T	V	F	L	G	D	N	P	I	N	M	L	S	S	R	Q	L	A	R	R	L	S	L	L	P	Q	H	H	L	T	P	E	G	I	T	V	Q	E	L	V	S	Y	G	R	N	P	W	L
Query Conservation
Alig confidence					.																																																																				.	.	.	.	.	.	.	.	.
Template Conservation					.																																																																				.	.	.	.	.	.	.	.	.
Template Sequence		Q	S	G	.	L	L	I	L	A	G	P	S	K	S	F	K	S	N	F	G	L	T	M	V	S	S	Y	M	R	Q	Y	P	D	A	V	C	L	F	Y	D	S	E	F	G	I	T	P	A	Y	L	R	S	M	G	V	D	P	E	R	V	I	H	T	P	V	Q	S	L	E	Q	L	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S		.								S	S	S	S																	T	T								S	S											T	T			G	G	G							S	B					.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.																																																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		52	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		S	L	W	G	R	L	S	A	E	D	N	A	R	V	N	V	A	M	N	Q	T	R	I	N	H	L	A	V	R	R	L	T	E	L	S	G	G	Q	R	Q	R	A	F	L	A	M	V	L	A	Q	N	T	P	V	V	L	L	D	E	P	T	T	Y	L	D	I	N	H	Q	V	D	L	M	R	L	M	G	E	.	.
Query Conservation																																																																																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																				.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Sequence		.	.	.	.	.	.	.	.	.	.	R	I	D	M	V	N	Q	L	D	A	I	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	K	V	V	V	F	I	D	.	S	L	G	N	L	A	S	K	T	R	A	K	T	M	K	S	L	F	R	I	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.										T			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T									.		S	T	T		B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
												122	.	.	.	.	.	.	.	130	.	.	.	.																											.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
					184	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	L	R	T	Q	G	K	T	V	V	A	V	L	H
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		T	P	Y	F	S	T	K	N	I	P	C	I	A	I	N	H
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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