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Job DescriptionP15031
Confidence99.61%DateThu Jan 5 11:34:16 GMT 2012
Rank70Aligned Residues209
% Identity26%Templatec2o5vA_
PDB info PDB header:replication/recombinationChain: A: PDB Molecule:dna replication and repair protein recf; PDBTitle: recombination mediator recf
Resolution1.61 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70....
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Query Sequence  TVSYGTDKVLNDVSLSLPTGKITALIGPNGCGKSTLLNCFSRLLMPQSGTVFLGDNPINMLSSRQL. . . . . . . . . . . . . .
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Template Sequence  ALSTLNYRNLAPGTLNFPEG. VTGIYGENGAGKTNLLEAAYLALTGQTDAPRIEQLIQAGETEAYVRADLQQGGSLSIQE
Template Known Secondary structure  SBTT

S

S.

TTSSS



SSGGGGB
TT
S
TT
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   8.10.........20....... ..30.........40.........50.........60.........70.........80......
 
   75....80
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ARRLSL
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Template Sequence  VGLGRGRRQLKVDGVRARTGDLPRGGAVWIRPEDSELVFGPPSGRRAYLDSLLSRLSARYGEQLSRYERTVSQRNAALRG
Template Known Secondary structure  TTTT
GGG

S


TTTTS

T
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   81........90.........100.........110.........120......... 130........
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Query Sequence  LPQHHLTPEGITVQELVSYGRNPWLSLWGRLSAEDNARVNVAMNQTRIN. HLAVRRLTE. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GEEWAMHVWDDVLLKLGTEIMLFRRRALTRLDELAREANAQLGSRKTLALTLTESTSPETYAADLRGRRAEELARGSTVT
Template Known Secondary structure  T
GGGTTTTTT

S

SS
TTTTTS


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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   139140.........150..... ....160.........170.........180.........190
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Query Sequence  . . . . . . . . . . . . . . . . . . . LSGGQRQRAFLAMVLAQ. . . . . . . . . NTPVVLLDEPTTYLDINHQVDLMRLMGELRTQGKT
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Template Sequence  GPHRDDLLLTLGDFPASDYASRGEGRTVALALRRAELELLREKFGEDPVLLLDDFTAELDPHRRQYLLDLAAS. . . . VPQ
Template Known Secondary structure  SGGG
TT

SS



GGG


....SS
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   247..250.........260.........270.........280.........290.........300.........310......... 320..
 
   191........200.... .....210.........220..
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Query Sequence  VVAVLHDLNQASRY. . . . . CDQLVVMANGHVMAQGTP
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Template Sequence  AIVTGTELAPGAALTLRAQAGRFTPVADEEMQAEGTA
Template Known Secondary structure  SS

TT
STT


TTTS
TT

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   323......330.........340.........350.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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