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Job DescriptionP15031
Confidence95.17%DateThu Jan 5 11:34:16 GMT 2012
Rank433Aligned Residues132
% Identity14%Templatec2j289_
PDB info PDB header:ribosomeChain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs
Resolution8.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70.........80.........90........
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Query Sequence  NDVSLSLPTGKITALIGPNGCGKSTLLNCFSRLLMPQSGTVFLGDNPINMLSSRQLARRLSLLPQHHLTPEGITVQELVS
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Template Sequence  QTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKK. . . . . . . . . . . . . . . . . . KVLVVSADVYR. . . . . . . . . . .
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   91........100.........110.........120.........130 .........140.
 
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Query Sequence  YGRNPWLSLWGRLSAEDNARVNVAMNQTRINHLAVRRLTELSGGQRQRAFLAMVLAQNTPVVLLDEPTTYLDINHQVDLM
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Template Sequence  . . . . . . . . . . . . . . PAAIKQLETLAEQVGVDFFPSDVGQKPV. . DIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEI
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   142.......150.........160......... 170.........180.........190.........200.....
 
   179180.........190.....
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Query Sequence  RLMGELRTQGKTVVAVL
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Template Sequence  KQVHASINPVETLFVVD
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   206...210.........220..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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