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Job DescriptionP15031
Confidence100.00%DateThu Jan 5 11:34:16 GMT 2012
Rank6Aligned Residues241
% Identity30%Templatec1z47B_
PDB info PDB header:ligand binding proteinChain: B: PDB Molecule:putative abc-transporter atp-binding protein; PDBTitle: structure of the atpase subunit cysa of the putative2 sulfate atp-binding cassette (abc) transporter from3 alicyclobacillus acidocaldarius
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.. .......20.........30.........40.........50.........60.........70.........80.
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Query Sequence  LRTENLTVSY. GTDKVLNDVSLSLPTGKITALIGPNGCGKSTLLNCFSRLLMPQSGTVFLGDNPINMLSSRQLARRLSLL
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Template Sequence  IEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQ. . KRNVGLV
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TTSTT

TT

STTSSTSS

STT
TT

GG..GSS
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   15....20.........30.........40.........50.........60.........70.........80..... ....90..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  PQHHLTPEGITVQELVSYGRNPWLSLWGRLSAEDNARVNVAMNQTRINHLAVRRLTELSGGQRQRAFLAMVLAQNTPVVL
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Template Sequence  FQNYALFQHMTVYDNVSF. . . . GLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLL
Template Known Secondary structure  TT



TTS
T....TGGGTT

TT
GGGTTS
GGGS
TT

S
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   93......100.........110 .........120.........130.........140.........150.........160........
 
   162.......170.........180.... .....190.........200.........210.........220...... ...230.......
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Query Sequence  LDEPTTYLDINHQVDLMRLMGEL. RTQGKTVVAVLHDLNQASRYCDQLVVMANGHVMAQGTPEEVM. . . TPGLLRTVFSV
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Template Sequence  FDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGE
Template Known Secondary structure  STTTTS


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   169170.........180.........190.........200.........210.........220.........230.........240........
 
   238.240.........
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Query Sequence  EAEIHPEPVSGR
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Template Sequence  SNVWTRAVQNGR
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BTT
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   249250.........260
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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