Job Description P15031 Confidence 98.43% Date Thu Jan 5 11:34:16 GMT 2012 Rank 93 Aligned Residues 147 % Identity 10% Template c1wxqA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of gtp binding protein from pyrococcus horikoshii2 ot3 Resolution 2.60 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	L	I	G	P	N	G	C	G	K	S	T	L	L	N	C	F	S	R	L	L	M	P	Q	S	G	T	V	F	L	G	D	N	P	I	N	M	L	S	S	R	Q	L	A	R	R	L	S	L	L	P	Q	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	V	V	G	K	P	N	V	G	K	S	T	F	F	S	A	A	T	L	A	N	V	G	V	T	Y	A	I	T	D	H	P	C	K	.	.	.	.	.	.	.	.	.	.	.	E	L	G	C	S	P	N	P	Q	N	Y	E	Y	R	N	G	L	A	L	I	P	V	K	X	V	D	V	A	F	L	D	D	L	R
Template Known Secondary structure								T	T	S	S																							S		S	.	.	.	.	.	.	.	.	.	.	.	S	S			S				S	S	S				T	T																S	S	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.												.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
																					85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	T	P	E	G	I	T	V	Q	E	L	V	S	Y	G	R	N	P	W	L	S	L	W	G	R	L	S	A	E	D	N	A	R	V	N	V	A	M	N	Q	T	R	I	N	.	H	L	A	V	R	R	L	T	E	L	S	G	G	Q	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																											.
Template Conservation																																				.	.	.	.
Template Sequence		X	A	S	A	L	I	H	V	V	D	A	T	G	K	T	D	P	E	G	Q	P	T	D	Y	H	D	P	V	E	D	I	E	F	L	.	.	.	.	E	R	E	I	D	Y	W	I	Y	G	I	L	S	K	G	W	D	K	F	A	K	R	I	K	L	Q	K	I	K	L	E	S	A	I	A	E	H	L	S	G	I	G
Template Known Secondary structure		T		S								T	T			B		T	T	S		B		S												.	.	.	.														T	T	T					S	T	T	T	S	S												T	G	G	G	T
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	A	F	L	A	M	V	L	A	Q	N	T	P	V	V	L	L	D	E	P	T	T	Y	L	D	I	N	H	Q	V	D	L	M	R	L	M	G	E	L	R	T	Q	G	K	T	V	V	A	V	L	H	D
Query Conservation
Alig confidence																																			.	.							.	.	.
Template Conservation																																			.	.							.	.	.
Template Sequence		V	N	E	N	D	V	W	E	A	X	H	K	L	N	L	P	E	D	P	T	K	W	S	Q	D	D	L	L	A	F	A	S	E	.	.	I	R	R	V	N	K	.	.	.	P	X	V	I	A	A	N	K	A
Template Known Secondary structure														T	T			S		G	G	G													.	.						S	.	.	.									G
Template Predicted Secondary structure																																			.	.							.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.				.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions