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Job DescriptionP15031
Confidence100.00%DateThu Jan 5 11:34:16 GMT 2012
Rank18Aligned Residues241
% Identity31%Templatec1vciA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:sugar-binding transport atp-binding protein; PDBTitle: crystal structure of the atp-binding cassette of multisugar2 transporter from pyrococcus horikoshii ot3 complexed with3 atp
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MTLRTENLTVSYGTDKVLNDVSLSLPTGKITALIGPNGCGKSTLLNCFSRLLMPQSGTVFLGDNPINMLSSRQLARRLSL
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Template Sequence  VEVKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKD. . RNISM
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   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  LPQHHLTPEGITVQELVSYGRNPWLSLWGRLSAEDNARVNVAMNQTRINHLAVRRLTELSGGQRQRAFLAMVLAQNTPVV
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Template Sequence  VFQH. . . . . . MTVYENIAF. . . . . . PLKKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVL
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Query Sequence  LLDEPTTYLDINHQVDLMRLMGEL. RTQGKTVVAVLHDLNQASRYCDQLVVMANGHVMAQGTPEEVMTP. . . GLLRTVFS
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Template Sequence  LMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFVATFIG
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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   237..240.........250.....
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Query Sequence  VEAEIHPEPVSGRPMCLMR
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Template Sequence  APEMNILEVSVGDGYLEGR
Template Known Secondary structure  SS


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   245....250.........260...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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