Job Description P15031 Confidence 99.37% Date Thu Jan 5 11:34:16 GMT 2012 Rank 78 Aligned Residues 168 % Identity 12% Template c1u9iA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites Resolution 2.80 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	T	V	S	Y	G	T	D	K	V	L	N	D	V	S	L	S	L	P	T	G	K	I	T	A	L	I	G	P	N	G	C	G	K	S	T	L	L	N	C	F	S	R	L	L	M	P	Q	S	G	T	V	F	L	G	D	N	P	I	N	M	L	S	S	R	Q	L	A	R	R	L	S	L	L	P	Q	H	H	L
Query Conservation
Alig confidence																																																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		N	V	R	V	S	S	G	V	V	R	L	D	E	M	C	G	G	G	F	F	K	D	S	I	I	L	A	T	G	A	T	G	T	G	K	T	L	L	V	S	R	F	V	E	N	A	C	A	N	K	E	R	A	I	L	F	A	Y	E	E	S	R	A	Q	L	L	R	N	A	Y	S	W	G	M	D	.	.	.	.	.
Template Known Secondary structure								S								T	T	S	S			S	S									T	T	S	S														T	T	T								S	S	S											T	T	S			.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	E	G	I	T	V	Q	E	L	V	S	Y	G	R	N	P	W	L	S	L	W	G	R	L	S	A	E	D	N	A	R	V	N	V	A	M	N	Q	T	R	I	N	H	L	A	V	R	R	L	T	E	L	S	G	G	Q	R	Q	R	A	F	L	A	M	V	L	A	Q	N	T	P	V	V	L	L	D	E	P	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	E	M	E	R	Q	N	L	L	K	I	V	C	A	Y	P	E	S	A	G	L	E	D	H	L	Q	I	I	K	S	E	I	N	D	F	K	P	A	R	I	A	I	D	S	L	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S								G	G	G	S															T	T			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																			335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
						167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.									.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure		.	.	.	.																															.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																															.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	T	Y	L	D	I	N	H	Q	V	D	L	M	R	L	M	G	E	L	R	T	Q	G	K	T	V	V	A	V	L	H	.	.	.	.	.	.	.	.	D	L	N	Q	A	S	R	Y	C	D	Q	L	V	V	M	A
Query Conservation		.	.	.	.																															.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	A	R	G	V	S	N	N	A	F	R	Q	F	V	I	G	V	T	G	Y	A	K	Q	E	E	I	T	G	L	F	T	N	T	S	D	Q	F	M	G	A	H	S	I	T	D	S	H	I	I	T	D	T	I	I	L	L	Q
Template Known Secondary structure				T	S	S	S																			T	T										S	S	S	S				S	S		S	S					S
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions