Job Description P11519 Confidence 1.11% Date Thu Jan 5 11:32:42 GMT 2012 Rank 50 Aligned Residues 45 % Identity 29% Template c3h0gN_ PDB info PDB header:transcription Chain: N: PDB Molecule:dna-directed rna polymerase ii subunit rpb2; PDBTitle: rna polymerase ii from schizosaccharomyces pombe Resolution 3.65 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.											.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	T	Q	L	S	C	L	V	C	V	D	R	V	S	H	T	V	D	I	H	L	S	D	T	K	I	A	V	R	D	.	.	.	.	.	.	.	.	.	.	S	L	Q	R	R	I	Q	G	G	G	G	F	H	G
Query Conservation																																	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	R	K	L	V	A	Q	V	F	L	G	P	T	Y	Y	Q	R	L	K	H	L	V	D	D	K	I	H	A	R	A	R	G	P	V	Q	I	L	T	R	Q	P	V	E	G	R	S	R	D	G	G	L	R	F	G
Template Known Secondary structure		S			B		S	S		B											S			S	T	T	T					S	S			B		S	S	S		S	B			S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		1066	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions