Job Description Q9JMT1 Confidence 2.94% Date Thu Jan 5 12:38:06 GMT 2012 Rank 74 Aligned Residues 81 % Identity 14% Template c3o0yC_ PDB info PDB header:lipid binding protein Chain: C: PDB Molecule:lipoprotein; PDBTitle: the crystal structure of the putative lipoprotein from colwellia2 psychrerythraea Resolution 1.70 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.												.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																	.	.	.																		.	.	.	.	.	.	.	.	.	.	.							.	.	.																			.	.	.	.	.	.	.
Query SS confidence																	.	.	.																		.	.	.	.	.	.	.	.	.	.	.							.	.	.																			.	.	.	.	.	.	.
Query Sequence		M	A	H	A	R	R	K	I	H	D	V	H	A	R	A	.	.	.	P	T	D	V	T	T	E	A	L	Q	R	I	S	E	L	Y	A	.	.	.	.	.	.	.	.	.	.	.	I	E	V	A	V	R	.	.	.	G	C	S	A	E	Q	R	L	A	A	R	K	A	R	P	A	P	L	.	.	.	.	.	.	.
Query Conservation																	.	.	.																		.	.	.	.	.	.	.	.	.	.	.							.	.	.																			.	.	.	.	.	.	.
Alig confidence																	.	.	.																		.	.	.	.	.	.	.	.	.	.	.							.	.	.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	T	I	I	E	K	Q	T	A	D	A	A	Q	N	W	L	P	S	K	V	T	L	Q	G	A	I	K	Y	L	K	G	F	T	S	G	S	A	E	Q	H	P	F	V	N	V	F	R	E	K	I	E	K	V	D	S	L	T	T	E	Q	K	Q	S	L	I	T	Q	V	I	A	K	V	S	Q	V	V	Y	P	A
Template Known Secondary structure															T	T																			T	S	S		G	G	G	S											T	T			S	S																			T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		M	Q	S	L	Y	D	W	I	Q	T	Q	M	K	T	L	A	R	H	S	D	T	.	.	.	.	.	A	K	A	F
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.
Template Conservation
Template Sequence		Y	Q	S	V	E	K	A	S	E	Q	L	L	S	E	A	R	S	E	S	G	I	W	A	Q	P	K	G	S	V	Y
Template Known Secondary structure													T	T	T	S		S			S	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions