Job Description P52108 Confidence 64.80% Date Thu Jan 5 12:05:24 GMT 2012 Rank 218 Aligned Residues 85 % Identity 14% Template d1r8ja2 SCOP info Flavodoxin-like CheY-like N-terminal domain of the circadian clock protein KaiA Resolution 2.03

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		1	.				.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure				.	.	.																																										.	.
Query SS confidence				.	.	.																																										.	.
Query Sequence		M	N	.	.	.	T	I	V	F	V	E	D	D	A	E	V	G	S	L	I	A	A	Y	L	A	K	H	D	M	Q	V	T	V	E	P	R	G	D	Q	A	E	E	T	I	L	R	.	.	E	N	P	D	L	V	L	L	D	I	M	L	P	G	K	D	G	M	T	I	C	R	D	L	R	A	K	W	S	G	P	I
Query Conservation				.	.	.																																										.	.
Alig confidence				.	.	.																																										.	.																				.
Template Conservation																																																																					.
Template Sequence		V	L	S	Q	I	A	I	C	I	W	V	E	S	T	A	I	L	Q	D	C	Q	R	A	L	S	A	D	R	Y	Q	L	Q	V	C	E	S	G	E	M	L	L	E	Y	A	Q	T	H	R	D	Q	I	D	C	L	I	L	V	A	A	N	P	S	F	R	A	V	V	.	Q	Q	L	C	F	E	G	V	V	V	P	A
Template Known Secondary structure																									T		S	T	T								S											S	T	T	S		S						T	T	S	T	T						.						T	T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	T	S	L	D	S	D	M	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	V	G	D	R	D	P	A	K	E
Template Known Secondary structure					S						S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions