 |
Job Description | P52108 | Confidence | 75.26% | Date | Thu Jan 5 12:05:24 GMT 2012 |
Rank | 188 | Aligned Residues | 111 |
% Identity | 14% | Template | d1j5ta_ |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| Tryptophan biosynthesis enzymes
|
Resolution | 3.00 |
|
 |
  |   |
4 | . | . | . | . | . | |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
. | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Query Sequence |   |
I | V | F | V | E | D | . |
D | A | E | V | G | S | L | I | A | A | Y | L | A | K | H | D | M | Q | V | T | . |
V | E | P | R | G | D | Q | A | E | E | T | I | L | R | E | N | P | D | L | V | L | L | . |
. |
. |
D | I | M | L | P | G | K | D | G | M | T | I | C | R | D | L | R | A | K | W | . |
S | G | P | I | V | L |
Query Conservation |   |
|
|
|
|
|
| . |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   | . |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|   | . | . | . |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   | . |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
Template Sequence |   |
L | I | I | A | R | I | L | T | A | E | Q | I | K | E | I | Y | E | A | A | E | E | L | G | M | D | S | L | V | E | V | H | S | R | E | D | L | E | K | V | F | S | V | I | R | P | K | I | I | G | I | N | T | R | D | L | D | T | F | E | I | K | K | N | V | L | W | E | L | L | P | L | V | P | D | D | T | V | V | V | A |
Template Known Secondary structure |   |
 |  |  | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |
|
|
| S |  |  |  |  |
|
|
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  | G | G | G | S |
| T | T | S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
  |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | S | L | D | S | D | M | N | H | I | L | A | L | E | M | G | A | C | . |
. |
. |
. |
. |
D | Y | I | L | K | T | T | P | P | A | V | L | L | A | R | L | R | L | H |
Query Conservation |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   | . | . | . | . | . |
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |   |
|   |
| . |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |
|
|
|   |
Template Sequence |   |
E | S | G | I | K | D | P | R | E | L | . |
K | D | L | R | G | K | V | N | A | V | L | V | G | T | S | I | M | K | A | E | N | P | R | R | F | L | E | E | M | R | A | W |
Template Known Secondary structure |   |
 | S |
|
| S | S | G | G | G |  | . |  |  |  | T | T | T |
| S |  |  |  |  | S |  |  |  |  | T | S | S | S |  |  |  |  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
187 | . | . | 190 | . | . | . | . | . | . | |
. | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|