 |
Job Description | P52108 | Confidence | 27.79% | Date | Thu Jan 5 12:05:24 GMT 2012 |
Rank | 385 | Aligned Residues | 89 |
% Identity | 11% | Template | d1h1ya_ |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| D-ribulose-5-phosphate 3-epimerase
|
Resolution | 1.87 |
|
 |
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | R | G | D | Q | A | E | E | T | I | L | R | E | N | P | D | L | V | L | L | D | . |
. |
. |
. |
. |
I | M | L | P | G | K | D | G | M | T | I | C | R | D | L | R | A | K | W | S | G | P | I | V | L | L | T | S | L | D | S | D | M | N | . |
H | I | L | A | L | E | M | G | A | C | D | Y | I | L | K | T | T | P | P |
Query Conservation |   |
  |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|   |
| . | . | . | . | . |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |   | . |   |   |   |
|   |   |   |
|
|   |
|
|
|   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |   |   |   |
Template Sequence |   |
A | N | L | A | A | E | A | D | R | M | V | R | L | G | A | D | W | L | H | M | D | I | M | D | G | H | F | V | P | N | L | T | I | G | A | P | V | I | Q | S | L | R | K | H | T | K | A | Y | L | D | C | H | L | M | V | T | N | P | S | D | Y | V | E | P | L | A | K | A | G | A | S | G | F | T | F | H | I | E | V | S |
Template Known Secondary structure |   |
G | G |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |  | B | S | S | S | S | S |
| B |
|
|
|  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |  |  | S | S |
| G | G | G | G |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  | G | G | G |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | L | L | A | R | L | R | L | H | L | R | Q | N | E |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
R | D | N | W | Q | E | L | I | Q | S | I | K | A | K | G |
Template Known Secondary structure |   |
T | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|