Job Description P52108 Confidence 36.89% Date Thu Jan 5 12:05:24 GMT 2012 Rank 335 Aligned Residues 60 % Identity 15% Template c3jthA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription activator hlyu; PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6 Resolution 2.00 Å

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		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230					.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.
Query SS confidence																																																																						.	.	.	.
Query Sequence		S	T	A	D	F	E	L	L	W	E	L	A	T	H	A	G	Q	I	M	D	R	D	A	L	L	K	N	L	R	G	V	S	Y	D	G	L	D	R	S	V	D	V	A	I	S	R	L	R	K	K	L	L	D	N	A	A	E	P	Y	R	I	K	T	V	R	N	K	G	.	.	.	.	Y	L	F	A	P	H	A	W
Query Conservation																																																																						.	.	.	.
Alig confidence																	.	.	.											.	.	.	.	.												.	.	.	.								.	.	.	.	.									.	.	.	.
Template Conservation																	.	.	.											.	.	.	.	.												.	.	.	.								.	.	.	.	.
Template Sequence		N	E	R	R	L	Q	I	L	C	X	L	H	N	Q	E	.	.	.	L	S	V	G	E	L	C	A	K	L	.	.	.	.	.	Q	L	S	Q	S	A	L	S	Q	H	L	.	.	.	.	A	W	L	R	R	D	G	.	.	.	.	.	L	V	T	T	R	K	E	A	Q	T	V	Y	Y	T	L	K	S	E	E	V
Template Known Secondary structure		S										T	T	T	S		.	.	.											.	.	.	.	.	T											.	.	.	.						T	T	.	.	.	.	.	S							T	T
Template Predicted Secondary structure																	.	.	.											.	.	.	.	.												.	.	.	.								.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.						.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		239
Predicted Secondary structure
Query SS confidence
Query Sequence		E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		85

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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