Return to main results Retrieve Phyre Job Id

Job DescriptionP52108
Confidence55.19%DateThu Jan 5 12:05:24 GMT 2012
Rank248Aligned Residues99
% Identity10%Templatec3hvbB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:protein fimx; PDBTitle: crystal structure of the dual-domain ggdef-eal module of2 fimx from pseudomonas aeruginosa
Resolution2.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20......... 30.........40.........50.........60....... ..70.........80.
Predicted Secondary structure 



..




















......










Query SS confidence 



















. .





































. . . . . .













Query Sequence  DAEVGSLIAAYLAKHDMQVT. . VEPRGDQAEETILRENPDLVLLDIMLPGKDGMTICRDL. . . . . . RAKWSGPIVLLTSL
Query Conservation         
   
   
  
 .. 
    


        



 

 

   
       ......
      

 

  
Alig confidence 



















..





































......













Template Conservation          
  
   
  






     
  
  
  
 



               
   
         


 

Template Sequence  YLKQAKQLTQGLATLHCQAAISQFGCSLNPFNALKHLTVQFIKIDGSFVQDLNQVENQEILKGLIAELHEQQKLSIVPFV
Template Known Secondary structure  TTT
T
SSSTTGGGGTS

S
GGGGSSTTSTT



Template Predicted Secondary structure 

























Template SS confidence 















































































   574.....580.........590.........600.........610.........620.........630.........640.........650...
 
   82.......90...... ...100........
Predicted Secondary structure 

....



Query SS confidence 














. . . .











Query Sequence  DSDMNHILALEMGAC. . . . DYILKTTPPAVL
Query Conservation          
   

 ....


 

     
Alig confidence 














....











Template Conservation 
       
   
    

     
    

Template Sequence  ESASVLATLWQAGATYIQGYYLQGPSQAMDY
Template Known Secondary structure 
ST
S

TTT


BSS


Template Predicted Secondary structure 















Template SS confidence 






























   654.....660.........670.........680....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions