Return to main results Retrieve Phyre Job Id

Job DescriptionP52108
Confidence99.89%DateThu Jan 5 12:05:24 GMT 2012
Rank54Aligned Residues121
% Identity21%Templatec3hv2B_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:response regulator/hd domain protein; PDBTitle: crystal structure of signal receiver domain of hd domain-2 containing protein from pseudomonas fluorescens pf-5
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70. ........80
Predicted Secondary structure 































.





Query SS confidence 





































































.








Query Sequence  NTIVFVEDDAEVGSLIAAYLAKHDMQVTVEPRGDQAEETILRENPDLVLLDIMLPGKDGMTICRDLRAKW. SGPIVLLTS
Query Conservation   






       
   
   
  
  
    


        



 

 

   
       
   .   

 

 
Alig confidence 





































































.








Template Conservation   






       
   
   
  
  
     
   
     
 

 
  

   
      
        

 

 
Template Sequence  PEILLVDSQEVILQRLQQLLSPLPYTLHFARDATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTG
Template Known Secondary structure 

S
TTSS
SSTTS

S
S

SSS

TT
S
Template Predicted Secondary structure 






























Template SS confidence 















































































   13......20.........30.........40.........50.........60.........70.........80.........90..
 
   81........90..... ....100.........110.........120..
Predicted Secondary structure 


.



Query SS confidence 














.


























Query Sequence  LDSDMNHILALEMGA. CDYILKTTPPAVLLARLRLHLRQNEQA
Query Conservation           
   

. 


 

     
   
   
 
    
Alig confidence 














.


























Template Conservation               
     
 

     
   
   
     
Template Sequence  DPDLKLIAKAINEGEIYRYLSKPWDDQELLLALRQALEHQHSE
Template Known Secondary structure 


TT

SSS


Template Predicted Secondary structure 













Template SS confidence 










































   93......100.........110.........120.........130.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions