Job Description P52108 Confidence 24.76% Date Thu Jan 5 12:05:24 GMT 2012 Rank 407 Aligned Residues 120 % Identity 9% Template c3h5lB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:putative branched-chain amino acid abc PDBTitle: crystal structure of a putative branched-chain amino acid2 abc transporter from silicibacter pomeroyi Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10					.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30								.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure											.	.	.	.																					.	.	.	.	.	.	.
Query SS confidence											.	.	.	.																					.	.	.	.	.	.	.
Query Sequence		N	T	I	V	F	V	E	D	D	.	.	.	.	A	E	V	G	S	L	I	A	A	Y	L	A	K	H	D	M	Q	V	T	V	.	.	.	.	.	.	.	E	P	R	G	D	Q	A	E	E	T	I	L	R	E	N	P	D	L	V	L	L	D	I	M	L	P	G	K	D	G	M	T	I	C	R	D	L	R	A	K
Query Conservation											.	.	.	.																					.	.	.	.	.	.	.
Alig confidence											.	.	.	.																					.	.	.	.	.	.	.																															.
Template Conservation																																																																								.
Template Sequence		N	K	I	A	I	I	T	G	P	G	I	Y	S	V	N	I	A	N	A	I	R	D	G	A	G	E	Y	G	Y	D	V	S	L	F	E	T	V	A	I	P	V	S	D	W	G	P	T	L	A	K	L	R	A	D	P	P	A	V	I	V	V	T	H	F	Y	P	Q	D	Q	A	.	L	F	M	N	Q	F	M	T	D
Template Known Secondary structure		S								S	S														G	G	G	G	T											S	S		S												S			S														.							T	T	S
Template Predicted Secondary structure																																																																								.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	S	G	P	I	V	L	L	T	S	L	D	S	D	M	N	H	I	L	A	L	E	M	G	A	C	D	Y	I	L	K	T	T	P	P	A	V	L	L	A	R	L	R	L	H	L	R	Q	N	E	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	T	N	S	L	V	Y	L	Q	Y	G	A	S	L	A	A	F	R	D	I	A	G	D	N	S	V	G	V	T	Y	A	T	V	L	G	T	L	Q	D	E	M	G	D	A	F	A	K	A	Y	K	E	R
Template Known Secondary structure				S							S	G	G	G	S								G	G	G	G	T	T						S	S				S	S
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions