Job Description P52108 Confidence 99.85% Date Thu Jan 5 12:05:24 GMT 2012 Rank 91 Aligned Residues 117 % Identity 21% Template c3eqzB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of a response regulator from colwellia2 psychrerythraea Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		M	N	T	I	V	F	V	E	D	D	A	E	V	G	S	L	I	A	A	Y	L	A	K	H	D	M	Q	V	T	V	E	P	R	G	D	Q	A	E	E	T	I	L	R	E	N	P	D	L	V	L	L	D	I	M	L	P	G	K	D	G	M	T	I	C	R	D	L	R	A	K	W	.	S	G	P	I	V	L	L	T
Query Conservation																																																																									.
Alig confidence																															.																																										.
Template Conservation																															.
Template Sequence		L	N	R	V	F	I	V	D	D	D	T	L	T	C	N	L	L	K	T	I	V	E	P	I	F	G	N	V	E	.	A	F	Q	H	P	R	A	F	L	T	L	S	L	N	K	Q	D	I	I	I	L	D	L	M	M	P	D	M	D	G	I	E	V	I	R	H	L	A	E	H	K	S	P	A	S	L	I	L	I	S
Template Known Secondary structure										S													T	T	T		S				.			S						T	T					T	T									T	T	S	S												T	T			S
Template Predicted Secondary structure																															.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.
Query SS confidence					.	.	.	.	.
Query Sequence		S	L	D	.	.	.	.	.	S	D	M	N	H	I	L	A	L	E	M	G	A	C	D	Y	I	L	K	T	T	P	P	A	V	L	L	A	R	L	R	L	H	L	R	Q
Query Conservation					.	.	.	.	.
Alig confidence					.	.	.	.	.
Template Conservation
Template Sequence		G	Y	D	S	G	V	L	H	S	A	E	T	L	A	L	S	C	G	L	N	V	I	N	T	F	T	K	P	I	N	T	E	V	L	T	C	F	L	T	S	L	S	N	R
Template Known Secondary structure				G	G	G												T	T									S	S																T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions