Job Description P52108 Confidence 54.80% Date Thu Jan 5 12:05:24 GMT 2012 Rank 249 Aligned Residues 119 % Identity 16% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		2	.	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.							.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure											.	.	.																									.	.	.	.	.	.																																					.	.
Query SS confidence											.	.	.																									.	.	.	.	.	.																																					.	.
Query Sequence		N	T	I	V	F	V	E	D	D	.	.	.	A	E	V	G	S	L	I	A	A	Y	L	A	K	H	D	M	Q	V	T	V	E	P	R	G	.	.	.	.	.	.	D	Q	A	E	E	T	I	L	R	E	N	P	D	L	V	L	L	D	I	M	L	P	G	K	D	G	M	T	I	C	R	D	L	R	A	K	.	.
Query Conservation											.	.	.																									.	.	.	.	.	.																																					.	.
Alig confidence											.	.	.																									.	.	.	.	.	.																																					.	.
Template Conservation
Template Sequence		T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	K	A	K	A	A	T	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K
Template Known Secondary structure												S																T																									T	T		S										S	S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
											71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																						.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																						.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	W	S	G	P	I	V	L	L	T	S	L	D	S	D	M	N	H	I	L	A	L	.	.	.	.	E	M	G	A	C	D	Y	I	L	K	T	T	P	P	A	V	L	L	A	R	L	R	L	H	L	R	Q	N	E
Query Conservation		.	.	.	.	.	.	.	.	.																						.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation
Template Sequence		A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T	G	L	N	M	L	P	Q	A	R	E	F	N	E	V	V	G	I	T	G	L	I	L	T	K	L	D	G	S	A	R	G	G	C	V	V	S	V	V	E	E	L	G
Template Known Secondary structure					T	T	S	T	T			S								G	G	G	G	G	G	G											T											S	S		S		T
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions