Job Description P52108 Confidence 74.72% Date Thu Jan 5 12:05:24 GMT 2012 Rank 189 Aligned Residues 106 % Identity 9% Template c2r6oB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative diguanylate cyclase/phosphodiesterase (ggdef & eal PDBTitle: crystal structure of putative diguanylate cyclase/phosphodiesterase2 from thiobacillus denitrificans Resolution 1.80 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.																										.	.	.	.	.																.	.
Query SS confidence																							.	.																										.	.	.	.	.																.	.
Query Sequence		D	D	A	E	V	G	S	L	I	A	A	Y	L	A	K	H	D	M	Q	V	T	.	.	V	E	P	R	G	D	Q	A	E	E	T	I	L	R	E	N	P	D	L	V	L	L	D	I	M	.	.	.	.	.	L	P	G	K	D	G	M	T	I	C	R	D	L	R	A	.	.	K	W	S	G	P	I	V	L	L	T
Query Conservation																							.	.																										.	.	.	.	.																.	.
Alig confidence																							.	.																										.	.	.	.	.																.	.
Template Conservation
Template Sequence		V	X	T	D	E	V	R	T	C	L	D	A	L	R	A	R	G	V	R	L	A	L	D	D	F	G	T	G	Y	S	S	L	S	Y	L	S	Q	L	P	F	H	G	L	K	I	D	Q	S	F	V	R	K	I	P	A	H	P	S	E	T	Q	I	V	T	T	I	L	A	L	A	R	G	L	G	X	E	V	V	A	E
Template Known Secondary structure		G															T	T									T	S	S										S													T	T	T	T	T																			T
Template Predicted Secondary structure
Template SS confidence
		624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		S	L	D	S	D	M	N	H	I	L	A	L	E	M	G	A	C	.	.	.	.	D	Y	I	L	K	T	T	P	P	A	V	L	L	A	R	L	R	L
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.
Template Conservation
Template Sequence		G	I	E	T	A	Q	Q	Y	A	F	L	R	D	R	G	C	E	F	G	Q	G	N	L	X	S	T	P	Q	A	A	D	A	F	A	S	L	L	D	R
Template Known Secondary structure					S									T	T	T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		704	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions