 |
Job Description | P52108 | Confidence | 46.07% | Date | Thu Jan 5 12:05:24 GMT 2012 |
Rank | 280 | Aligned Residues | 92 |
% Identity | 12% | Template | c2qy9A_ |
PDB info |
PDB header:protein transport | Chain: A: PDB Molecule:cell division protein ftsy; |
PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy
|
Resolution | 1.90 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | |
|
|
. | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Query Sequence |   |
N | T | I | V | F | V | E | D | D | . |
. |
. |
A | E | V | G | S | L | I | A | A | Y | L | A | K | H | D | M | Q | V | T | V | E | P | R | . |
. |
. |
. |
. |
. |
. |
G | D | Q | A | E | E | T | I | L | R | E | N | P | D | L | V | L | L | D | I | M | L | P | G | K | D | G | M | T | I | C | R | D | L | R | A | K | . |
Query Conservation |   |
  |
|
|
|
|
|
|
|   | . | . | . |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   | . | . | . | . | . | . | . |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |   |
|   |
|
|   |   |
|   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |
Template Sequence |   |
K | S | V | M | L | A | A | G | D | T | F | R | A | A | A | V | E | Q | L | Q | V | W | G | Q | R | N | N | I | P | V | I | A | Q | H | T | G | A | D | S | A | S | V | I | F | D | A | I | Q | A | A | K | A | R | N | I | D | V | L | I | A | D | T | A | G | R | L | Q | N | K | S | H | L | M | E | E | L | K | K | I | V |
Template Known Secondary structure |   |
|
|  |  |  |  |
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |
|
| S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
|
|
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
322 | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
W | S | G | P | I | V | L | L | T | S | L | D | S | D | M | N | H | I | L | A | L | E | M |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | V | M | K | K | L | D | V | E | A | P | H | E | V | M | L | T | I | D | A | S | T | G | Q | N | A | V | S | Q | A | K | L | F |
Template Known Secondary structure |   |
 |  |  | T | T | T |
| T | T |
|
| S |  |  |  |  |  |  |  | G | G | G | T |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
402 | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|