Job Description P52108 Confidence 99.91% Date Thu Jan 5 12:05:24 GMT 2012 Rank 24 Aligned Residues 119 % Identity 24% Template c2qr3A_ PDB info PDB header:transcription Chain: A: PDB Molecule:two-component system response regulator; PDBTitle: crystal structure of the n-terminal signal receiver domain of two-2 component system response regulator from bacteroides fragilis Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		M	N	T	I	V	F	V	E	D	D	A	E	V	G	S	L	I	A	A	Y	L	A	K	H	D	M	Q	V	T	V	E	P	R	G	D	Q	A	E	E	T	I	L	R	E	N	P	D	L	V	L	L	D	I	M	L	P	G	K	D	G	M	T	I	C	R	D	L	R	A	K	W	.	S	G	P	I	V	L	L	T
Query Conservation																																																																									.
Alig confidence																																																																									.
Template Conservation
Template Sequence		L	G	T	I	I	I	V	D	D	N	K	G	V	L	T	A	V	Q	L	L	L	K	N	H	F	S	K	V	I	T	L	S	S	P	V	S	L	S	T	V	L	R	E	E	N	P	E	V	V	L	L	D	M	N	F	T	S	N	E	G	L	F	W	L	H	E	I	K	R	Q	Y	R	D	L	P	V	V	L	F	T
Template Known Secondary structure										S													T	T	T	S	S																		S									T	T	T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	D	S	D	M	N	H	I	L	A	L	E	M	G	A	C	D	Y	I	L	K	T	T	P	P	A	V	L	L	A	R	L	R	L	H	L	R	Q	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	A	D	I	D	L	A	V	R	G	I	K	E	G	A	S	D	F	V	V	K	P	W	D	N	Q	K	L	L	E	T	L	L	N	A	A	S	Q	A
Template Known Secondary structure			G	G	G										T	T								S															T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions