Job Description P52108 Confidence 89.68% Date Thu Jan 5 12:05:24 GMT 2012 Rank 163 Aligned Residues 86 % Identity 14% Template c2q5cA_ PDB info PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum Resolution 1.49 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure				.																												.															.	.																																	.
Query SS confidence				.																												.															.	.																																	.
Query Sequence		M	N	.	T	I	V	F	V	E	D	D	A	E	V	G	S	L	I	A	A	Y	L	A	K	H	D	M	Q	V	T	.	V	E	P	R	G	D	Q	A	E	E	T	I	L	R	.	.	E	N	P	D	L	V	L	L	D	I	M	L	P	G	K	D	G	M	T	I	C	R	D	L	R	A	K	W	S	G	P	I	.
Query Conservation				.																												.															.	.																																	.
Alig confidence				.																												.															.	.										.	.	.	.	.	.	.	.																.
Template Conservation																																																										.	.	.	.	.	.	.	.
Template Sequence		L	S	L	K	I	A	L	I	S	Q	N	E	N	L	L	N	L	F	P	K	L	A	L	E	K	N	F	I	P	I	T	K	T	A	S	L	T	R	A	S	K	I	A	F	G	L	Q	D	E	V	D	A	I	I	S	R	.	.	.	.	.	.	.	.	G	A	T	S	D	Y	I	K	K	S	V	S	I	P	S	I
Template Known Secondary structure											S																T																					T	T	T		S						.	.	.	.	.	.	.	.									T	T		S	S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.									.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
			76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	V	L	L	T	S	L	D	S	D	M	N	H	I	L	A	L	E	M	G
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		S	I	K	V	T	R	F	D	T	M	R	A	V	Y	N	A	K	R	F	G
Template Known Secondary structure																		G	G	G
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions