Return to main results Retrieve Phyre Job Id

Job DescriptionP52108
Confidence99.78%DateThu Jan 5 12:05:24 GMT 2012
Rank117Aligned Residues103
% Identity27%Templatec2jzyA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcriptional regulatory protein pcor; PDBTitle: solution structure of c-terminal effector domain of2 putative two-component-system response regulator involved3 in copper resistance from klebsiella pneumoniae
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160.........170.........180.........190.........200.........210...
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  TPYKALHFGTLTIDPINRVVTLANTEISLSTADFELLWELATHAGQIMDRDALLKNLRGVSYDGLDRSVDVAISRLRKKL
Query Conservation                              
   
  

  
        
   
   
          

   
 


 

Alig confidence 















































































Template Conservation   
      
   

     
      
 

  
  

  
    
  

   
   

          
   
 


 

Template Sequence  MAATVCTIADMTVDMVRRTVIRSGKKIHLTGKEYVLLELLLQRTGEVLPRSLISSLVWNMNFDSDTNVIDVAVRRLRSKI
Template Known Secondary structure 




TT
TTT

TT



TTTS
B
T


SS
STTTTT
Template Predicted Secondary structure 


























Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   214.....220.........230.......
Predicted Secondary structure 














Query SS confidence 























Query Sequence  LDNAAEPYRIKTVRNKGYLFAPHA
Query Conservation           
 



 



    
Alig confidence 



.


















Template Conservation      .    
 

 
 

 
    
Template Sequence  DDDF. EPKLIHTVRGAGYVLEIRE
Template Known Secondary structure  TTTS.S




TTT
B

S
Template Predicted Secondary structure 



.









Template SS confidence 























   81... .....90.........100...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions