Return to main results Retrieve Phyre Job Id

Job DescriptionP52108
Confidence91.00%DateThu Jan 5 12:05:24 GMT 2012
Rank161Aligned Residues44
% Identity14%Templatec2jpcA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:ssrb; PDBTitle: ssrb dna binding protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   165....170.........180.........190.........200.........210.......
Predicted Secondary structure 















Query SS confidence 




















































Query Sequence  ADFELLWELATHAGQIMDRDALLKNLRGVSYDGLDRSVDVAISRLRKKLLDNA
Query Conservation   
  

  
        
   
   
          

   
 


 

    
Alig confidence 











....









.....





















Template Conservation 

  

   
 
.... 
  


  
..... 

  

      
  

 
  
Template Sequence  RERQVLKLIDEG. . . . YTNHGISEKL. . . . . HISIKTVETHRMNMMRKLQVHK
Template Known Secondary structure  TS....

ST.....
S
T
SS
Template Predicted Secondary structure 


....

.....






Template SS confidence 




















































   16...20....... ..30....... ..40.........50.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions