Job Description P52108 Confidence 100.00% Date Thu Jan 5 12:05:24 GMT 2012 Rank 5 Aligned Residues 217 % Identity 24% Template c2hqrA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		M	N	T	I	V	F	V	E	D	D	A	E	V	G	S	L	I	A	A	Y	L	A	K	H	D	M	Q	V	T	V	E	P	R	G	D	Q	A	E	E	T	I	L	R	E	N	P	D	L	V	L	L	D	I	M	L	P	G	K	D	G	M	T	I	C	R	D	L	R	A	K	W	.	S	G	P	I	V	L	L	T
Query Conservation																																																																									.
Alig confidence				.																																																.	.	.	.																		.
Template Conservation				.																																																.	.	.	.
Template Sequence		M	R	.	V	L	L	I	E	K	N	S	V	L	G	G	E	I	E	K	G	L	N	V	K	G	F	M	A	D	V	T	E	S	L	E	D	G	E	Y	L	M	D	I	R	N	Y	D	L	V	M	.	.	.	.	V	S	D	K	N	A	L	S	F	V	S	R	I	K	E	K	H	S	S	I	V	V	L	V	S	S
Template Known Secondary structure				.						S													G	G	G	T							S	S									T	T	S			S				.	.	.	.				T	T													T	T	S
Template Predicted Secondary structure				.																																																.	.	.	.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	D	S	D	M	N	H	I	L	A	L	E	M	G	A	C	D	Y	I	L	K	T	T	P	P	A	V	L	L	A	R	L	R	L	H	L	R	Q	N	E	Q	A	T	L	T	K	G	L	Q	E	T	S	L	T	P	Y	K	A	L	H	F	G	T	L	T	I	D	P	I	N	R	V	V	T	L	A	N	T	E
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	N	P	T	S	E	E	E	V	H	A	F	E	Q	G	A	D	D	Y	I	A	K	P	Y	R	S	I	K	A	L	V	A	R	I	E	A	R	L	R	F	W	G	S	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	I	G	D	L	T	I	S	P	D	E	E	K	I	I	Y	K	G	R	E
Template Known Secondary structure		S	S													T		S					T	T		S		T											T	S	S					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T					T	T	T	T					T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120															.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	L	S	T	A	D	F	E	L	L	W	E	L	A	T	H	A	G	Q	I	M	D	R	D	A	L	L	K	N	L	R	G	V	S	Y	D	G	L	D	R	S	V	D	V	A	I	S	R	L	R	K	K	L	L	D	N	A	A	E	P	Y	R	I	K	T	V	R	N	K	G	Y	L	F	A	P	H	A
Query Conservation
Alig confidence																																																										.
Template Conservation																																																										.
Template Sequence		V	E	V	K	G	K	P	F	E	V	L	T	H	L	A	R	H	R	D	Q	I	V	S	K	E	Q	L	L	D	A	I	W	E	E	P	E	M	V	T	P	N	V	I	E	V	A	I	N	Q	I	R	Q	K	M	D	K	.	P	L	G	I	S	T	V	E	T	V	R	R	R	G	Y	R	F	C	Y	P	K
Template Known Secondary structure						S	T	T	T									T		S															S	S		S		G	G	G	T														T	.	T	S	S	S							S	S	S								G
Template Predicted Secondary structure																																																										.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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