Job Description P52108 Confidence 53.31% Date Thu Jan 5 12:05:24 GMT 2012 Rank 254 Aligned Residues 84 % Identity 15% Template c1uwvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:23s rrna (uracil-5-)-methyltransferase ruma; PDBTitle: crystal structure of ruma, the iron-sulfur cluster2 containing e. coli 23s ribosomal rna 5-methyluridine3 methyltransferase Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.		30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																												.			.													.	.
Query SS confidence																												.			.													.	.
Query Sequence		N	T	I	V	F	V	E	D	D	A	E	V	G	S	L	I	A	A	Y	L	A	K	H	D	M	Q	.	V	T	.	V	E	P	R	G	D	Q	A	E	E	T	I	.	.	L	R	E	N	P	D	L	V	L	L	D	I	M	L	P	G	K	D	G	M	T	I	C	R	D	L	R	A	K	W	S	G	P	I	V	L
Query Conservation																												.			.													.	.
Alig confidence																												.			.													.	.												.	.
Template Conservation																																																									.	.
Template Sequence		A	S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	A	R	L	N	G	L	Q	N	V	T	F	Y	H	E	N	L	E	E	D	V	T	K	Q	P	W	A	K	N	G	F	D	K	V	L	L	D	.	.	P	A	R	A	G	A	A	G	V	X	Q	Q	I	I	K	L	E	P	I	R	I	V	Y
Template Known Secondary structure		S							S															T	T			S								T	T	S			S	S	S	G	G	G	T	T			S						.	.			T	T															S
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.			.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	S	L	D	S	D	M	N	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	C	N	P	A	T	L	A	R
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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