Job Description P38101 Confidence 1.67% Date Thu Jan 5 11:57:58 GMT 2012 Rank 24 Aligned Residues 105 % Identity 11% Template d1oede_ SCOP info Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Resolution 4.0

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.
Query SS confidence																																																																						.	.	.
Query Sequence		P	A	A	V	H	L	L	S	W	A	G	A	A	Y	I	V	W	L	A	W	K	I	A	T	S	P	T	K	E	D	G	L	Q	A	K	P	I	S	F	W	A	S	F	A	L	Q	F	V	N	V	K	I	I	L	Y	G	V	T	A	L	S	T	F	V	L	P	Q	T	.	.	.	Q	A	L	S	W	V	V	G	V
Query Conservation																																																																						.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.
Template Sequence		P	L	F	Y	I	I	N	I	I	A	P	C	V	L	I	S	S	L	V	V	L	V	Y	F	L	P	A	Q	A	G	G	Q	K	.	.	.	.	.	.	.	.	.	C	T	L	S	I	S	V	L	L	A	Q	T	I	F	L	F	L	I	A	Q	K	V	P	E	T	S	L	N	V	P	L	I	G	K	Y	L	I	F
Template Known Secondary structure				S							T																		T			T	T		.	.	.	.	.	.	.	.	.																													S					S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.										.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	L	L	A	M	I	G	T	F	G	N	V	C	W	A	L	A	G	H	L	F	Q	R	L	F	R	Q	Y	G	R	Q	L	N	I	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	M	F	V	S	M	L	I	V	M	N	C	V	I	V	L	N	V	S	L	R	T	G	K	V	I	D	K	A	C	F	W	I	A	L	L	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions