Job Description P38101 Confidence 0.70% Date Thu Jan 5 11:57:58 GMT 2012 Rank 95 Aligned Residues 88 % Identity 6% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	V	M	L	L	C	A	G	I	S	F	S	L	A	V	I	D	P	A	A	V	H	L	L	S	W	A	G	A	A	Y	I	V	W	L	A	W	K	I	A	T	S	P	T	K	E	D	G	L	Q	A	K	P	I	S	F	W	A	S	F	A	L	Q	F	V	N	V	K	I	I	L	Y	G	V	T	A	L	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	L	L	A	I	S	G	V	F	F	S	L	G	A	Y	F	A	G	A	L	E	I	I	V	Y	A	G	A	I	M	V	L	F	V	F	V	V	M	M	L	N	L	G	G	S	E	I	E	Q	E	R	Q	W	L	K	P	Q	V	W	I	G	P	A	I	L	S	A	I	M	L	V	V	I	V	Y	A	I	L	G
Template Known Secondary structure														T	T											T																			S	S	T	T						T	T		S																							T	T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		131	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	L	P	Q	T	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	D	Q	G	I	D	G
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions