Job Description P38101 Confidence 2.01% Date Thu Jan 5 11:57:58 GMT 2012 Rank 14 Aligned Residues 104 % Identity 8% Template c2w8aC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:glycine betaine transporter betp; PDBTitle: crystal structure of the sodium-coupled glycine betaine2 symporter betp from corynebacterium glutamicum with bound3 substrate Resolution 3.35 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	S	A	F	W	T	Y	T	L	I	T	A	M	T	P	G	P	N	N	I	L	A	L	S	S	A	T	S	H	G	F	R	Q	S	T	R	V	L	A	G	M	S	L	G	F	L	I	V	M	L	L	C	A	G	I	S	F	S	L	A	V	I	D	P	A	A	V	H	L	L	S	W	A	G	A	A	Y	I	V
Query Conservation
Alig confidence																																																													.
Template Conservation																																																													.
Template Sequence		I	A	X	I	L	L	G	T	F	F	I	T	S	A	D	S	A	S	T	V	X	G	T	X	S	Q	H	G	Q	L	E	A	N	K	W	V	T	A	A	W	G	V	A	T	A	A	I	G	L	T	L	L	L	S	G	G	D	N	A	.	L	S	N	L	Q	N	V	T	I	V	A	A	T	P	F	L	F	V	V	I
Template Known Secondary structure																										T	T	T	T		S	S																									G	G	G		.
Template Predicted Secondary structure																																																													.
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.		.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	A	W	K	I	A	T	S	P	T	K	E	D	G	L	Q	A	K	P	I	S	F	W	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	X	F	A	L	V	K	D	L	S	N	D	V	I	Y	L	E	Y	R	E	Q	Q	R	F
Template Known Secondary structure													T
Template Predicted Secondary structure
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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