Return to main results Retrieve Phyre Job Id

Job DescriptionP38101
Confidence0.94%DateThu Jan 5 11:57:58 GMT 2012
Rank64Aligned Residues96
% Identity13%Templatec1p7bB_
PDB info PDB header:metal transportChain: B: PDB Molecule:integral membrane channel and cytosolic domains; PDBTitle: crystal structure of an inward rectifier potassium channel
Resolution3.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6970.........80.........90.........100.........110.........120.........130.........140........
Predicted Secondary structure 
















Query SS confidence 















































































Query Sequence  PAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQAKPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVL
Query Conservation        
   
   

 
                    
  
    
 

                              
Alig confidence 









































............

























Template Conservation   
   
             

 

              
  
............
 

  
 





   
       
Template Sequence  SWPVFFASLAALFVVNNTLFALLYQLGDAPIANQSPPGFVGA. . . . . . . . . . . . FFFSVETLATVGYGDMHPQTVYAHAI
Template Known Secondary structure 
TTTSSSSS



SSSSST............TTTTTT


S




S
Template Predicted Secondary structure 











............









Template SS confidence 















































































   5960.........70.........80.........90.........100 .........110.........120......
 
   149150.........160.........170......
Predicted Secondary structure 
Query SS confidence 



























Query Sequence  LAMIGTFGNVCWALAGHLFQRLFRQYGR
Query Conservation                              
Alig confidence 



























Template Conservation         
        
 
 

  

  
Template Sequence  ATLEIFVGMSGIALSTGLVFARFARPRA
Template Known Secondary structure  TS


Template Predicted Secondary structure 

Template SS confidence 



























   127..130.........140.........150....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions