Return to main results Retrieve Phyre Job Id

Job DescriptionP13669
Confidence92.07%DateThu Jan 5 11:33:42 GMT 2012
Rank200Aligned Residues32
% Identity16%Templated1zyba1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.....
Predicted Secondary structure 







Query SS confidence 































Query Sequence  ALQTEFGVSRVTVRQALRQLVEQQILESIQGS
Query Conservation 


   



 


 

  
   


    
 
Alig confidence 































Template Conservation   

 










 

 

  


 
 

 
Template Sequence  DLARCLDDTRLNISKTLNELQDNGLIELHRKE
Template Known Secondary structure  TS
TTS
TT
Template Predicted Secondary structure 





Template SS confidence 































   179180.........190.........200.........210
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions