 |
Job Description | P13669 | Confidence | 92.65% | Date | Thu Jan 5 11:33:42 GMT 2012 |
Rank | 195 | Aligned Residues | 36 |
% Identity | 11% | Template | d1z6ra1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| ROK associated domain
|
Resolution | 2.70 |
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | E | S | A | L | Q | T | E | F | G | V | S | R | V | T | V | R | Q | A | L | R | Q | L | V | E | Q | Q | I | L | E | S | I | Q | G | S | G | T | Y | V |
Query Conservation |   |
|
|   |
|
|
|   |   |   |
|
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |   |
|
|
|
|   |   |
|
|
|   |
|
|   |
|
|   |   |   |
|
|
|   |
| . | . | . |   |
|   |   |   |
Template Sequence |   |
S | R | I | D | L | S | R | L | A | Q | L | A | P | A | S | I | T | K | I | V | H | E | X | L | E | A | H | L | V | Q | E | . |
. |
. |
L | G | L | V | V |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  | . | . | . |
|
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
. | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|