Job Description P13669 Confidence 94.23% Date Thu Jan 5 11:33:42 GMT 2012 Rank 137 Aligned Residues 76 % Identity 17% Template c3pqkD_ PDB info PDB header:transcription Chain: D: PDB Molecule:biofilm growth-associated repressor; PDBTitle: crystal structure of the transcriptional repressor bigr from xylella2 fastidiosa Resolution 2.09 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		I	A	D	R	I	R	E	Q	I	A	R	G	E	L	K	P	G	D	A	L	P	T	E	S	A	L	Q	T	E	F	G	V	S	R	V	T	V	R	Q	A	L	R	Q	L	V	E	Q	Q	I	L	E	S	I	Q	G	S	G	.	.	.	T	Y	V	K	E	E	R	V	N	Y	D	I	F	Q	L	T	S	F	D	E
Query Conservation																																																											.	.	.
Alig confidence																.	.	.	.	.	.	.																																					.	.	.
Template Conservation																.	.	.	.	.	.	.
Template Sequence		V	R	L	X	L	V	C	T	L	V	E	G	E	F	.	.	.	.	.	.	.	S	V	G	E	L	E	Q	Q	I	G	I	G	Q	P	T	L	S	Q	Q	L	G	V	L	R	E	S	G	I	V	E	T	R	R	N	I	K	Q	I	F	Y	R	L	T	E	A	K	A	A	Q	L	V	N	A	L	Y	T	I	F	C
Template Known Secondary structure												T			B	.	.	.	.	.	.	.										T			T	T												T	T	S						S	S	S								S	S	T												T	G
Template Predicted Secondary structure																.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.								50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		87	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	S	D	R	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	E	K	Q	A
Template Known Secondary structure		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions