Job Description P13669 Confidence 99.88% Date Thu Jan 5 11:33:42 GMT 2012 Rank 6 Aligned Residues 160 % Identity 18% Template c3f8lC_ PDB info PDB header:transcription Chain: C: PDB Molecule:hth-type transcriptional repressor phnf; PDBTitle: crystal structure of the effector domain of phnf from mycobacterium2 smegmatis Resolution 1.90 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	I	F	Q	L	T	S	F	D	E	K	L	S	D	R	H	V	D	T	H	S	E	V	L	I	F	E	V	I	P	A	D	D	F	L	Q	Q	Q	L	Q	I	T	P	Q	D	R	V	W	H	V	K	R	V	R	Y	R	K	Q	K	P	M	A	L	E	E	T	W	M	P	L	A	L	F	P	D	L	T	W	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Q	P	L	G	M	G	S	Y	T	E	A	A	K	A	Q	G	L	S	A	G	R	I	L	V	A	W	S	D	L	T	A	D	E	V	L	A	G	V	L	G	V	D	V	G	A	P	V	L	Q	L	E	R	V	L	T	T	D	G	V	R	V	G	L	E	T	T	K	L	P	A	Q	R	Y	P	G	L	R	E	T
Template Known Secondary structure							S	S									T	T																								T			T	T													T	T												G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	E	N	S	K	Y	H	F	I	E	E	V	K	K	M	V	I	D	R	S	E	Q	E	I	I	P	L	M	P	T	E	E	M	S	R	L	L	N	I	S	Q	T	K	P	I	L	E	K	V	S	R	G	Y	L	V	D	G	R	V	F	E	Y	S	R	N	A	F	N	T	D	D	Y	K	F	T	L	I	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	H	E	A	S	L	Y	A	E	I	R	S	R	G	I	A	F	T	R	T	V	D	T	I	D	T	A	L	P	D	A	R	E	A	A	L	L	G	A	D	A	R	T	P	M	F	L	L	N	R	V	S	Y	D	Q	D	D	V	A	I	E	Q	R	R	S	L	Y	R	G	D	R	M	T	F	T	A	V	M	H
Template Known Secondary structure				T	T	S									T	T																								T			T	T	S												T	T	S												T	T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions