Job Description P13669 Confidence 100.00% Date Thu Jan 5 11:33:42 GMT 2012 Rank 5 Aligned Residues 217 % Identity 29% Template c2wv0H_ PDB info PDB header:transcription Chain: H: PDB Molecule:hth-type transcriptional repressor yvoa; PDBTitle: crystal structure of the gntr-hutc family member yvoa from2 bacillus subtilis Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	K	P	L	Y	R	Q	I	A	D	R	I	R	E	Q	I	A	R	G	E	L	K	P	G	D	A	L	P	T	E	S	A	L	Q	T	E	F	G	V	S	R	V	T	V	R	Q	A	L	R	Q	L	V	E	Q	Q	I	L	E	S	I	Q	G	S	G	T	Y	V	K	E	E	R	V	N	Y	D	I	F	Q	L
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.																											.	.	.	.
Template Sequence		S	P	I	P	I	Y	Y	Q	I	M	E	Q	L	K	T	Q	I	K	N	G	E	L	Q	P	D	M	P	L	P	S	E	R	E	Y	A	.	.	.	.	.	.	.	.	E	Q	R	Q	A	L	S	N	L	V	N	E	G	L	L	Y	R	L	T	F	V	S	K	P	K	M	.	.	.	.	E	Q	A	L	Q	G	L
Template Known Secondary structure		S	S	S																	T	S	S		T	T		B									.	.	.	.	.	.	.	.											T	T	T	S													.	.	.	.	S	T	T	T	S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.																											.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	F	D	E	K	L	S	D	R	H	V	D	T	H	S	E	V	L	I	F	E	V	I	P	A	D	D	F	L	Q	Q	Q	L	Q	I	T	P	Q	D	R	V	W	H	V	K	R	V	R	Y	R	K	Q	K	P	M	A	L	E	E	T	W	M	P	L	A	L	F	P	D	L	T	W	Q	V	M	E	N	S	K
Query Conservation
Alig confidence																																					.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.
Template Sequence		T	S	F	T	E	D	M	K	S	R	G	M	T	P	G	S	R	L	I	D	Y	Q	L	I	D	S	T	E	E	L	A	A	I	L	S	.	.	.	.	.	.	I	H	K	I	T	R	V	R	L	A	N	D	I	P	M	A	I	E	S	S	H	I	P	F	E	L	A	G	E	L	N	E	S	H	F	Q	S	S	I
Template Known Secondary structure										T	T	T																									.	.	.	.	.	.											T	T																	S			T	T	T	T	T	S
Template Predicted Secondary structure																																					.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.							.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H	F	I	E	E	V	K	K	M	V	I	D	R	S	E	Q	E	I	I	P	L	M	P	T	E	E	M	S	R	L	L	N	I	S	Q	T	K	P	I	L	E	K	V	S	R	G	Y	L	V	D	G	R	V	F	E	Y	S	R	N	A	F	N	T	D	D	Y	K	F	T	L	I	A	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	H	I	E	R	Y	N	S	I	P	I	S	R	A	K	Q	E	L	E	P	S	A	A	T	T	E	E	A	N	I	L	G	I	Q	K	G	A	P	V	L	L	I	K	R	T	T	Y	L	Q	N	G	T	A	F	E	H	A	K	S	V	Y	R	G	D	R	Y	T	F	V	H	Y	M	D	R
Template Known Secondary structure									T																									T	S		T	T													T	T	S												T	T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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