Job Description P13669 Confidence 44.78% Date Thu Jan 5 11:33:42 GMT 2012 Rank 401 Aligned Residues 37 % Identity 19% Template c2o8kA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: nmr structure of the sigma-54 rpon domain bound to the-242 promoter element Resolution UNK

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.
Query Sequence		Q	I	A	D	R	I	R	E	Q	I	A	R	G	E	L	K	P	G	D	A	L	P	T	E	S	A	L	Q	T	E	F	.	.	.	.	.	G	V	S	R	V	T	V	R	Q
Query Conservation																																	.	.	.	.	.
Alig confidence																.	.						.										.	.	.	.	.
Template Conservation																.	.						.
Template Sequence		E	L	M	K	L	I	K	E	I	V	E	N	E	D	.	.	K	R	K	P	Y	.	S	D	Q	E	I	A	N	I	L	K	E	K	G	F	K	V	A	R	R	T	V	A	K
Template Known Secondary structure		T	T									T	T	S		.	.	T	T	S			.													T
Template Predicted Secondary structure																.	.						.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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