Job Description P13669 Confidence 85.80% Date Thu Jan 5 11:33:42 GMT 2012 Rank 232 Aligned Residues 55 % Identity 20% Template c2k27A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:paired box protein pax-8; PDBTitle: solution structure of human pax8 paired box domain Resolution UNK

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	L	Y	R	Q	I	A	D	R	I	R	E	Q	I	A	R	G	E	L	K	P	G	D	A	L	P	T	E	S	A	L	Q	T	E	F	G	V	S	R	V	T	V	R	Q	A	L	R	Q	L	V	E	Q	Q	I	L	E	S	I	Q	G	S	G
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.
Template Sequence		R	P	L	P	E	V	V	R	Q	R	I	V	D	L	A	H	Q	G	V	.	.	.	.	.	.	.	.	R	P	C	D	I	S	R	Q	L	R	V	S	H	G	C	V	S	K	I	L	G	R	Y	Y	E	T	G	S	I	R	P	G	V	I	G	G
Template Known Secondary structure			S	S															T		.	.	.	.	.	.	.	.										T			S										S	S	T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.									.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions