Job Description P16690 Confidence 98.83% Date Thu Jan 5 11:35:41 GMT 2012 Rank 120 Aligned Residues 135 % Identity 13% Template c3kfvA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:tight junction protein zo-3; PDBTitle: crystal structure of the sh3-kinase fragment of tight2 junction protein 3 (tjp3) in apo-form Resolution 2.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	I	W	L	M	G	P	S	G	S	G	K	D	S	L	L	A	E	L	R	L	R	E	Q	T	Q	L	L	V	A	H	R	Y	I	T	R	D	A	S	A	G	S	E	N	H	I	A	L	S	E	Q	E	F	F	T	R	A	G	Q	N	L	L	A	L	S	W	H	A	N	G	L	Y	Y	G	V	G	V	E	I
Query Conservation
Alig confidence											.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	P	V	V	I	L	G	P	V	.	.	.	A	D	I	A	X	Q	K	L	T	A	E	X	P	D	Q	F	E	I	A	E	T	V	I	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	T	V
Template Known Secondary structure								S	T	T	.	.	.													T	T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		633	.	.	.	.	.	.	640	.				.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.																																								.	.	.	670
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.
Query SS confidence																																																																				.	.	.	.
Query Sequence		D	L	W	L	H	A	G	F	D	V	L	V	N	G	S	R	A	H	L	P	Q	A	R	A	R	Y	Q	S	A	L	L	P	V	C	L	Q	V	S	P	E	I	L	R	Q	R	L	E	N	R	G	R	E	N	A	S	E	I	N	A	R	L	A	R	A	A	R	.	.	.	.	Y	T	P	Q	D	C	H	T	L	N
Query Conservation																																																																				.	.	.	.
Alig confidence																																																																				.	.	.	.
Template Conservation
Template Sequence		R	V	I	A	E	K	D	K	H	A	L	L	D	V	T	P	S	A	I	E	R	L	N	Y	V	Q	Y	Y	P	I	V	V	F	F	I	P	E	S	R	P	A	L	K	A	L	R	Q	W	L	A	P	A	S	R	R	S	T	R	R	L	Y	A	Q	A	Q	K	L	R	K	H	S	S	H	L	F	T	A	T	I	P
Template Known Secondary structure							T	T																		T	T											S													S	T	T																				G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		679	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	G	S	L	R	Q	S	V	D	T	L	L	T	L	I	H	Q	K	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	G	T	S	D	T	W	Y	Q	E	L	K	A	I	I	R	E	Q	Q	T
Template Known Secondary structure				S	S	S	T														T	T
Template Predicted Secondary structure
Template SS confidence
		759	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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