Job Description P16690 Confidence 99.44% Date Thu Jan 5 11:35:41 GMT 2012 Rank 95 Aligned Residues 174 % Identity 13% Template c3asyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:uridine kinase; PDBTitle: ligand-free structure of uridine kinase from thermus thermophilus hb8 Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.											.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		M	G	K	L	I	W	L	M	G	P	S	G	S	G	K	D	S	L	L	A	E	L	R	L	R	E	Q	T	Q	L	L	V	A	H	R	.	.	.	.	.	.	.	.	.	.	Y	I	T	R	D	A	S	A	G	S	E	N	H	I	A	L	S	E	Q	E	F	F	T	R	A	G	Q	N	L	L	A	L	S	W	H
Query Conservation																																					.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	P	F	V	I	G	I	A	G	G	T	A	S	G	K	T	T	L	A	Q	A	L	A	R	T	L	G	E	R	V	A	L	L	P	M	D	H	Y	Y	K	D	L	G	H	L	P	L	E	E	R	L	R	V	N	Y	D	H	P	D	A	F	D	L	A	L	Y	L	E	H	A	Q	A	L	L	R	G	L	P	V	E
Template Known Secondary structure												T	T	S	S													G	G	G						G	G	G		B				T	T	S		T	T	S	S	S	S	S		T	T	S	G	G	G	B														T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.
Query Sequence		A	N	G	L	Y	Y	G	V	G	V	E	I	D	L	W	L	H	A	G	F	D	V	L	V	N	G	S	R	A	H	L	P	Q	A	R	A	R	Y	Q	S	A	L	L	P	V	C	L	Q	V	S	P	E	I	L	R	Q	R	L	E	N	R	.	.	.	.	.	G	R	E	N	A	S	E	I	N	A	R	L	A	R
Query Conservation																																																															.	.	.	.	.
Alig confidence																																																															.	.	.	.	.
Template Conservation
Template Sequence		M	P	V	Y	D	F	R	A	Y	T	R	S	P	R	R	T	P	V	R	P	A	P	V	V	I	L	E	G	I	L	V	L	Y	P	K	E	L	R	D	L	M	D	L	K	V	F	V	D	A	D	A	D	E	R	F	I	R	R	L	K	R	D	V	L	E	R	G	R	S	L	E	G	V	V	A	Q	Y	L	E	Q
Template Known Secondary structure							T	T	T	T													S						S	T	T	T	T	S	S					T	T		S																							T	S														T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		147	.	.	150	.	.	.									.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.
Query Sequence		A	A	R	Y	T	P	Q	.	.	.	.	.	.	.	.	D	C	H	T	L	N	N	D	G	S	L	R	Q	S	V	D	T	L	L	T	L	I
Query Conservation									.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	P	M	H	L	H	F	V	E	P	T	K	R	Y	A	D	V	I	V	P	R	G	G	Q	N	P	V	A	L	E	M	L	A	A	K	A
Template Known Secondary structure									T	T	G	G	G	G	G	G		S					S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions