Job Description P16690 Confidence 99.64% Date Thu Jan 5 11:35:41 GMT 2012 Rank 45 Aligned Residues 173 % Identity 15% Template c2plrB_ PDB info PDB header:transferase Chain: B: PDB Molecule:probable thymidylate kinase; PDBTitle: crystal structure of dtmp kinase (st1543) from sulfolobus tokodaii2 strain7 Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	K	L	I	W	L	M	G	P	S	G	S	G	K	D	S	L	L	A	E	L	R	L	R	E	Q	T	Q	L	L	V	A	H	R	Y	I	T	R	D	A	S	A	G	S	E	N	H	I	A	L	S	E	Q	E	F	F	T	R	A	G	Q	N	L	L	A	L	S	W	H	A	N	G	L	Y	Y	G	V	G	V
Query Conservation
Alig confidence																																																																.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.
Template Sequence		K	G	V	L	I	A	F	E	G	I	D	G	S	G	K	S	S	Q	A	T	L	L	K	D	W	I	E	L	K	R	D	V	Y	L	T	E	S	D	W	I	H	D	I	I	K	E	A	K	K	K	D	L	L	T	P	L	T	F	S	L	I	H	.	.	.	.	.	.	.	.	A	T	D	F	S	D	R	Y	E	R
Template Known Secondary structure												T	T	S	S													T	T	T	S																				T	T												.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.									.	.	.	.	.	70	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.															.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	D	L	W	L	H	A	G	F	D	V	L	V	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	A	H	L	P	Q	A	R	A	R	Y	Q	S	A	L	L	P	V	C	L	Q	V	S	P	E	I	L	R	Q	R	L	E	N	R	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	I	L	P	X	L	K	S	G	F	I	V	I	S	D	R	Y	I	Y	T	A	Y	A	R	D	S	V	R	G	V	D	I	D	W	V	K	K	L	Y	S	F	A	I	K	P	D	I	T	F	Y	I	R	V	S	P	D	I	A	L	E	R	I	K	K	S	K	R	K	I	K	P	Q	E	A	G	A	D	I	F	P
Template Known Secondary structure		T							T	T						S	S											T	T	T										T	T	T	S				S																	T	T	T	T					T	T	T	T	T	T	T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
				135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.						.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure		.	.																		.	.	.	.	.
Query SS confidence		.	.																		.	.	.	.	.
Query Sequence		.	.	E	N	A	S	E	I	N	A	R	L	A	R	A	A	R	Y	T	.	.	.	.	.	P	Q	D	C	H	T	L	N	N	D	G	S	L	R	Q	S	V	D	T	L	L	T	L	I	H	Q	K	E	K	H	H
Query Conservation		.	.																		.	.	.	.	.
Alig confidence		.	.																		.	.	.	.	.
Template Conservation
Template Sequence		G	L	S	P	E	E	G	F	L	K	Y	Q	G	L	I	T	E	V	Y	D	K	L	V	K	D	E	N	F	I	V	I	D	G	T	K	T	P	K	E	I	Q	I	Q	I	R	K	F	V	G	E	L	I	D	N	S
Template Known Secondary structure		T	S																					T	T	T	T	T						T	T	S																		T	T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions