Job Description P16690 Confidence 99.60% Date Thu Jan 5 11:35:41 GMT 2012 Rank 56 Aligned Residues 174 % Identity 16% Template c2h92C_ PDB info PDB header:transferase Chain: C: PDB Molecule:cytidylate kinase; PDBTitle: crystal structure of staphylococcus aureus cytidine2 monophosphate kinase in complex with cytidine-5'-3 monophosphate Resolution 2.30 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.											.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	I	W	L	M	G	P	S	G	S	G	K	D	S	L	L	A	E	L	R	L	R	E	Q	T	Q	L	L	V	A	H	R	Y	I	T	R	D	A	S	A	G	S	E	N	H	I	A	L	S	E	Q	E	F	F	T	R	A	G	Q	N	.	.	.	.	.	.	.	.	.	.	L	L	A	L	S	W	H	A	N
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.
Alig confidence																																																															.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	I	A	L	D	G	P	A	A	A	G	K	S	T	I	A	K	R	V	A	S	E	L	S	M	I	Y	V	D	T	G	A	M	Y	R	A	L	T	Y	K	Y	L	K	L	N	K	T	E	D	F	A	K	L	V	D	Q	T	T	L	D	L	T	Y	K	A	D	K	G	Q	C	V	I	L	D	N	E	D	V	T
Template Known Secondary structure										T	T	S	S												T	T																				T	T	S		S								T									T	T								T	T				G
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.															.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query Sequence		G	L	Y	Y	G	V	G	V	E	I	D	L	W	L	H	A	G	F	D	V	L	V	N	G	S	R	A	H	L	P	Q	A	R	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Q	S	A	L	L	P	V	C	L	Q	V	S	P	E	I	L	R	Q	R	L	E	N	R	.	.	.	.	.	G	R
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation
Template Sequence		D	F	L	R	N	N	D	V	T	Q	H	V	S	Y	V	A	S	K	E	P	V	R	S	F	A	V	K	K	Q	K	E	L	A	A	E	K	G	I	V	M	D	G	R	D	I	G	T	V	V	L	P	D	A	D	L	K	V	Y	M	I	A	S	V	E	E	R	A	E	R	R	Y	K	D	N	Q	L	R	G	I	E
Template Known Secondary structure		G	G	S	S	S	S											T	S																T	T								S	S							T	T		S																							T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.											150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		E	N	A	S	E	I	N	A	R	L	A	R	A	A	R	.	.	.	.	.	.	.	.	.	.	Y	T	P	Q	D	C	H	T	L	N	N	D	G	.	S	L	R	Q	S	V	D	T	L	L	T	L	I	H	Q
Query Conservation																	.	.	.	.	.	.	.	.	.	.														.
Alig confidence																	.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		S	N	F	E	D	L	K	R	D	I	E	A	R	D	Q	Y	D	M	N	R	E	I	S	P	L	R	K	A	D	D	A	V	T	L	D	T	T	G	K	S	I	E	E	V	T	D	E	I	L	A	M	V	S	Q
Template Known Secondary structure																						S	S	S		S				T	T							T	T																T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions