Job Description P16690 Confidence 99.65% Date Thu Jan 5 11:35:41 GMT 2012 Rank 39 Aligned Residues 151 % Identity 21% Template c1zuiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:shikimate kinase; PDBTitle: structural basis for shikimate-binding specificity of helicobacter2 pylori shikimate kinase Resolution 2.30 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	W	L	M	G	P	S	G	S	G	K	D	S	L	L	A	E	L	R	L	R	E	Q	T	Q	L	L	V	A	H	R	Y	I	T	R	D	A	S	A	G	S	E	N	H	I	A	L	S	E	Q	E	F	F	T	R	A	G	Q	N	L	L	A	L	S	W	H	A	N	G	L	Y	Y	G	V	G	V	E	I	D	L
Query Conservation
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	L	I	G	F	M	G	S	G	K	S	S	L	A	Q	E	L	G	L	A	L	K	L	E	V	L	D	T	D	M	I	I	S	E	R	V	G	L	S	V	R	E	I	F	E	E	L	G	E	D	N	F	R	M	F	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	I	D	E
Template Known Secondary structure						S		T	T	S														T															T	S																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.																		.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																													.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.
Query Sequence		W	L	H	A	G	F	D	V	L	V	N	G	S	R	A	H	L	P	Q	A	R	A	R	Y	Q	S	A	L	L	P	V	C	L	Q	V	S	P	E	I	L	R	Q	R	L	E	N	R	G	R	E	N	A	S	E	I	N	A	R	L	.	.	.	.	.	A	R	A	A	R	Y	T	P	Q	D	C	H	T	L	N	N
Query Conservation																																																													.	.	.	.	.
Alig confidence																.	.																																												.	.	.	.	.
Template Conservation																.	.
Template Sequence		L	K	T	L	K	T	P	H	V	I	S	T	G	G	.	.	G	I	V	M	H	E	N	L	K	G	L	G	T	T	F	Y	L	K	M	D	F	E	T	L	I	K	R	L	N	Q	R	E	K	R	P	L	L	N	N	L	T	Q	A	K	E	L	F	E	K	R	Q	A	L	Y	E	K	N	A	S	F	I	I	D	A
Template Known Secondary structure			T	T		S	S								T	.	.	T	G	G	G		G	G	G	T	T	S																								G	G	G	G	S																				S
Template Predicted Secondary structure																.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	S	L	R	Q	S	V	D	T	L	L	T	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	G	L	N	N	S	L	K	Q	V	L	Q	F	I
Template Known Secondary structure		S	S												T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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