Job Description P16690 Confidence 99.64% Date Thu Jan 5 11:35:41 GMT 2012 Rank 42 Aligned Residues 176 % Identity 13% Template c1kjwA_ PDB info PDB header:neuropeptide Chain: A: PDB Molecule:postsynaptic density protein 95; PDBTitle: sh3-guanylate kinase module from psd-95 Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.							.
Query SS confidence																																															.	.	.							.
Query Sequence		M	G	K	L	I	W	L	M	G	P	S	G	S	G	K	D	S	L	L	A	E	L	R	L	R	E	Q	T	Q	L	L	V	A	H	R	Y	I	T	R	D	A	S	A	G	S	.	.	.	E	N	H	I	A	L	.	S	E	Q	E	F	F	T	R	A	G	Q	N	L	L	A	L	S	W	H	A	N	G	L	Y	Y
Query Conservation																																															.	.	.							.
Alig confidence																.	.	.																													.	.	.							.
Template Conservation																.	.	.
Template Sequence		Y	A	R	P	I	I	I	L	G	P	T	K	D	R	.	.	.	A	N	D	D	L	L	S	E	F	P	D	K	F	G	S	C	V	P	H	T	T	R	P	K	R	E	Y	E	I	D	G	R	D	Y	H	F	V	S	S	R	E	K	M	E	K	D	I	Q	A	H	K	F	I	E	A	G	Q	Y	N	S	H	L	Y
Template Known Secondary structure		S								S	T	T				.	.	.										T	T	T										S				T	T			B	T	T	T	B				S											T	T									T	T
Template Predicted Secondary structure																.	.	.
Template SS confidence
		533	.	.	.	.	.	.	540	.	.	.	.	.	.				.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
		78	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.
Predicted Secondary structure							.																																																																	.
Query SS confidence							.																																																																	.
Query Sequence		G	V	G	V	E	.	I	D	L	W	L	H	A	G	F	D	V	L	V	N	G	S	R	A	H	L	P	Q	A	R	A	R	Y	Q	S	A	L	L	P	V	C	L	Q	V	S	P	E	I	L	R	Q	R	L	E	N	R	G	R	E	N	A	S	E	I	N	A	R	L	A	R	.	A	A	R	Y	T	P	Q	D	C
Query Conservation							.																																																																	.
Alig confidence							.																																																																	.
Template Conservation
Template Sequence		G	T	S	V	Q	S	V	R	E	V	A	E	Q	G	K	H	C	I	L	D	V	S	A	N	A	V	R	R	L	Q	A	A	H	L	H	P	I	A	I	F	I	R	P	R	S	L	E	N	V	L	E	I	N	K	R	I	T	E	E	Q	A	R	K	A	F	D	R	A	T	K	L	E	Q	E	F	T	E	C	F	S
Template Known Secondary structure														T	T									T	T								T	T											S	S									T	T	S																				G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	L	N	N	D	G	S	L	R	Q	S	V	D	T	L	L	T	L	I	H	Q	K	E	K	H
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		A	I	V	E	G	D	.	S	F	E	E	I	Y	H	K	V	K	R	V	I	E	D	L	S	G	P
Template Known Secondary structure							S	.	S																S		S
Template Predicted Secondary structure								.
Template SS confidence
		690	.	.	.	.	.		.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions