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Job DescriptionP16690
Confidence99.36%DateThu Jan 5 11:35:41 GMT 2012
Rank103Aligned Residues164
% Identity11%Templatec1ankA_
PDB info PDB header:transferase(phosphotransferase)Chain: A: PDB Molecule:adenylate kinase; PDBTitle: the closed conformation of a highly flexible protein: the2 structure of e. coli adenylate kinase with bound amp and3 amppnp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  IWLMGPSGSGKDSLLAELRLREQTQLLVAHRYITRDASAGSENHIALSEQEFFTRAGQNLLALSWHANGLYYGVGVEIDL
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Template Sequence  IILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQA. . . . . KDIMDAGKLVTDELVIALVKERIAQEDC
Template Known Secondary structure 
TTSS



T
TTTTT
.....T



TTSS
T
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   3......10.........20.........30.........40......... 50.........60.........70.......
 
   86...90.........100.........110.........120.........130.......
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Query Sequence  WLHAGFDVLVNGSRAHLPQARARYQSALLPVCLQVSPEILRQRLENRGRENA. . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RN. GFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTR
Template Known Secondary structure  TS.

S


STTTTT


S

GGGTTTTTTTTB

SSTTB
TTT

B
B

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   78. 80.........90.........100.........110.........120.........130.........140.........150......
 
   138.140.........150.........160.........170.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . SEINARLARAARYTPQDCHTLNNDGSLRQSVDTLLTLI
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Template Sequence  KDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKIL
Template Known Secondary structure  TT
STTTS
TTS

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   157..160.........170.........180.........190.........200.........210...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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