Return to main results Retrieve Phyre Job Id

Job DescriptionP37014
Confidence60.90%DateThu Jan 5 11:54:25 GMT 2012
Rank6Aligned Residues81
% Identity12%Templated1vola2
SCOP infoCyclin-like Cyclin-like Transcription factor IIB (TFIIB), core domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   219220.........230.........240.........250......... 260.........270.........280.........290.......
Predicted Secondary structure  .






Query SS confidence 








































.





































Query Sequence  CGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGW. QEGMHEQAIKIALRMLEQGFEREIVLATTQLTDADIPN
Query Conservation                               
 
  

   
 . 

  

       

  
   
 


 



 



 
Alig confidence 








































.





































Template Conservation   
 
   
 
  
 
 
   
   
  
           

 
  



 

 
 
      
  


    

  

  
Template Sequence  LITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQ
Template Known Secondary structure 


GGGTT

TT
STT

TSSS


T

Template Predicted Secondary structure 























Template SS confidence 















































































   208.210.........220.........230.........240.........250.........260.........270.........280.......
 
   298.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  CH
Query Conservation 
 
Alig confidence 

Template Conservation   
Template Sequence  SY
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   288.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions