 |
Job Description | P28861 | Confidence | 99.30% | Date | Thu Jan 5 11:45:15 GMT 2012 |
Rank | 70 | Aligned Residues | 91 |
% Identity | 23% | Template | d1tvca1 |
SCOP info | Reductase/isomerase/elongation factor common domain
| Riboflavin synthase domain-like
| Ferredoxin reductase FAD-binding domain-like
|
Resolution | UNK |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | W | V | T | G | K | V | T | K | V | Q | N | W | T | D | A | L | F | S | L | T | V | H | A | P | V | . |
. |
. |
. |
. |
. |
. |
L | P | F | T | A | G | Q | F | T | K | L | G | L | E | I | D | G | E | R | V | Q | R | A | Y | S | Y | V | N | S | P | D | N | . |
P | D | L | E | F | Y | L | V | T | V | P | D | G | K |
Query Conservation |   |
  |   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|   |   |
|   | . | . | . | . | . | . | . |   |   |   |   |
|
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   | . | . |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
Template Sequence |   |
G | S | F | E | A | E | V | V | G | L | N | W | V | S | S | N | T | V | Q | F | L | L | Q | K | R | P | D | E | C | G | N | R | G | V | K | F | E | P | G | Q | F | M | D | L | T | I | P | G | T | D | . |
. |
V | S | R | S | Y | S | P | A | N | L | P | N | P | E | G | R | L | E | F | L | I | R | V | L | P | E | G | R |
Template Known Secondary structure |   |
S |  |  |  |  |  | B |
|
|
|  |  |  |  | T | T |  |  |  |  |  |  |
| S | S | T | T | S | S | S | S | S |
|
| S |
|
| S |
|
|  |  |  |  |
| T | T | S |
| S | . | . | S | S |  |  |  |
|
| B |
|
| S | S | S | S |
|
|  |  |  |  |  |
|
|
| T | T | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
  |
  |   |
75 | . | . | . | . | 80 | . | |
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  | . |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | S | P | R | L | A | A | . |
L | K | P | G | D | E | V | Q | V | V | S | E | A | A |
Query Conservation |   |
  |
|   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |   |
|   |   |
|
|   |
|   |
|   |
|
|   |
|
Template Sequence |   |
F | S | D | Y | L | R | N | D | A | R | V | G | Q | V | L | S | V | K | G | P | L | G |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  | S | S | S | S | S |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|