Return to main results Retrieve Phyre Job Id

Job DescriptionP28861
Confidence99.45%DateThu Jan 5 11:45:15 GMT 2012
Rank64Aligned Residues98
% Identity19%Templated1sm4a1
SCOP infoReductase/isomerase/elongation factor common domain Riboflavin synthase domain-like Ferredoxin reductase FAD-binding domain-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10........ .20....... ..30.........40....... ..50.........60 .........
Predicted Secondary structure 



.....

.











....





.....
Query SS confidence 













. . . . .








.



















. . . .












. . . . .








Query Sequence  VTGKVTKVQNWTDA. . . . . LFSLTVHAP. VLPFTAGQFTKLGLEIDGER. . . . VQRAYSYVNSPDN. . . . . PDLEFYLVT
Query Conservation    
 
  
   
  .....   
 
  
.     


 
 
     
  ....  
  

 
    .....         
Alig confidence 













.....








.



















....












.....








Template Conservation      

    

          
 
       
 


 
 
  

          
 






         
 
 

 
Template Sequence  YIGRCLLNTKITGDDAPGETWHMVFSTEGEIPYREGQSIGVIADGVDANGKPHKLRLYSIASSALGDFGDSKTVSLCVKR
Template Known Secondary structure 
S
TTSSS

TT




TT

SSB
TTS
B


B
S
TT
TTSSS

Template Predicted Secondary structure 








































Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   70 .........80.........90.........100..
Predicted Secondary structure 
.........


















Query SS confidence 
. . . . . . . . .































Query Sequence  V. . . . . . . . . PDGKLSPRLAALKPGDEVQVVSEAAGFFVLDE
Query Conservation   .........     
                  
       
Alig confidence 
.........































Template Conservation 
           
  
  
  
  

 
 
 

 
  
  

Template Sequence  LVYTNDKGEEVKGVCSNFLCDLKPGADVKITGPVGKEMLMPK
Template Known Secondary structure 

SSSS


T

TT

STT



Template Predicted Secondary structure 






















Template SS confidence 









































   166...170.........180.........190.........200.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions