Job Description P28861 Confidence 99.94% Date Thu Jan 5 11:45:15 GMT 2012 Rank 29 Aligned Residues 215 % Identity 19% Template c3qftA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadph--cytochrome p450 reductase; PDBTitle: crystal structure of nadph-cytochrome p450 reductase (fad/nadph domain2 and r457h mutant) Resolution 1.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.					.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.
Predicted Secondary structure															.	.	.	.												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	T	G	K	V	T	K	V	Q	N	W	T	D	.	.	.	.	A	L	F	S	L	T	V	H	A	P	V	.	.	L	P	F	T	A	G	Q	F	T	K	L	G	L	E	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.	.												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	L	A	A	V	T	T	N	R	K	L	N	Q	G	T	E	R	H	L	M	H	L	E	L	D	I	S	D	S	K	I	R	Y	E	S	G	D	H	V	A	V	Y	P	A	N	D	S	A	L	V	N	Q	L	G	K	I	L	G	A	D	L	D	V	V	M	S	L	N	N	L	D	E	E	S	N	K	K	H	P	F
Template Known Secondary structure														S	S	S	S	S										T	T	S						T	T																						T			T	T								S	S	T	T		S				S	S
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	C	P	T	S	Y	R	T	A	L	T	Y	Y	L	D	I	T	N	P	P	R	T	N	V	L	Y	E	L	A	Q	Y	A	S	E	P	S	E	Q	E	L	L	R	K	M	A	S	S	S	G	E	G	K	E	L	Y	L	S	W	V	V	E	A	R	R	H	I	L	A	I	L	Q	D	C	P	S	L	R	P	P	I
Template Known Secondary structure		S	S	S										T	B			S	S											G	G	G	B		S												S		S											T	T	T	T	T										S	T	T	B
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
									45	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.										.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.															.	.										.	.	.	.	.	.	.	.	.																					.	.	.
Query SS confidence		.	.	.	.	.	.	.															.	.										.	.	.	.	.	.	.	.	.																					.	.	.
Query Sequence		.	.	.	.	.	.	.	G	E	R	V	Q	R	A	Y	S	Y	V	N	S	P	.	.	D	N	P	D	L	E	F	Y	L	.	.	.	.	.	.	.	.	.	V	T	V	P	D	G	K	L	S	P	R	L	A	A	L	K	P	G	D	E	.	.	.	V	Q	V	V	S	E	A	A	G	F	F	V	L	D	E	V
Query Conservation		.	.	.	.	.	.	.															.	.										.	.	.	.	.	.	.	.	.																					.	.	.
Alig confidence		.	.	.	.	.	.	.															.	.										.	.	.	.	.	.	.	.	.																					.	.	.														.
Template Conservation																																																																															.
Template Sequence		D	H	L	C	E	L	L	P	R	L	Q	A	H	Y	Y	S	I	A	S	S	S	K	V	H	P	N	S	V	H	I	C	A	V	V	V	E	Y	E	T	K	A	G	R	I	N	K	G	V	A	T	N	W	L	R	A	K	E	P	V	N	G	G	R	A	L	V	P	M	F	V	R	K	S	Q	F	R	L	.	P	F
Template Known Secondary structure								S		B										S		T	T	T		T	T														T	T	S													T																			S				.		S
Template Predicted Secondary structure																																																																															.
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.		.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.																				.
Query SS confidence																											.	.	.	.																				.
Query Sequence		P	H	C	E	T	L	W	M	L	A	T	G	T	A	I	G	P	Y	L	S	I	L	Q	L	G	.	.	.	.	K	D	L	D	R	F	K	N	L	V	L	V	H	A	A	R	Y	A	A	.	D	L	S	Y	L	P	L	M	Q	E	L	E	K	R	Y	E	G	K	L	R	I	Q	T	V	V	S	R	E	T	A	A
Query Conservation																											.	.	.	.																				.
Alig confidence																											.	.	.	.																				.															.
Template Conservation																																																																	.
Template Sequence		K	A	T	T	P	V	I	M	V	G	P	G	T	G	V	A	P	F	I	G	F	I	Q	E	R	A	W	L	R	Q	Q	G	K	E	V	G	E	T	L	L	Y	Y	G	C	R	R	S	D	E	D	Y	L	Y	R	E	E	L	A	Q	F	H	R	D	.	G	A	L	T	Q	L	N	V	A	F	S	R	E	Q	S	H
Template Known Secondary structure		S	T	T	S								G	G	G	G																	T													S		T	T	T			T	T										T	.	T	S	S	S							T	T	S	S	S	S
Template Predicted Secondary structure																																																																	.
Template SS confidence
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.		.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		G	S	L	T	G	R	I	P	A	L	I	E	S	G	E	L	E	S	T	I	G	L	P	M	N	K	E	T	S	H	V	M	L	C	G	N	.	P	Q	M	V	R	D	T	Q	Q	L	L	K	E
Query Conservation																																						.
Alig confidence				.	.	.																			.	.	.											.
Template Conservation				.	.	.																			.	.	.
Template Sequence		K	V	.	.	.	Y	V	Q	H	L	L	K	Q	D	R	E	H	L	W	K	L	I	E	.	.	.	G	G	A	H	I	Y	V	C	G	D	A	R	N	M	A	R	D	V	Q	N	T	F	Y	D
Template Known Secondary structure				.	.	.									T										.	.	.	T	T									T	T	T
Template Predicted Secondary structure				.	.	.																			.	.	.
Template SS confidence
		605	.				.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.				.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions