Job Description P28861 Confidence 100.00% Date Thu Jan 5 11:45:15 GMT 2012 Rank 21 Aligned Residues 215 % Identity 17% Template c2gpjA_ PDB info PDB header:fad-binding protein Chain: A: PDB Molecule:siderophore-interacting protein; PDBTitle: crystal structure of a siderophore-interacting protein (sputcn32_0076)2 from shewanella putrefaciens cn-32 at 2.20 a resolution Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.																				.
Query SS confidence																												.	.	.	.																				.
Query Sequence		D	W	V	T	G	K	V	T	K	V	Q	N	W	T	D	A	L	F	S	L	T	V	H	A	P	V	.	.	.	.	L	P	F	T	A	G	Q	F	T	K	L	G	L	E	I	D	G	E	R	.	V	Q	R	A	Y	S	Y	V	N	S	P	D	N	P	D	L	E	F	Y	L	V	T	V	P	D	G	K	L	S	P
Query Conservation																												.	.	.	.																				.
Alig confidence																												.	.	.	.																				.
Template Conservation
Template Sequence		A	P	R	E	L	E	V	I	R	S	T	Y	I	T	P	H	X	L	R	I	T	L	G	G	A	G	L	A	G	F	P	A	D	Q	E	S	A	Y	I	K	L	L	F	P	Q	A	G	E	R	P	L	X	R	T	Y	T	I	R	Q	Q	R	D	D	E	I	D	V	D	F	V	L	H	D	T	D	G	P	A	S	S
Template Known Secondary structure																T	T								S	G	G	G	T	T			S			T	T										T	T	S														T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	A	A	L	K	P	G	D	E	V	Q	V	V	S	E	A	A	G	F	F	V	L	D	E	V	P	H	C	E	T	L	W	M	L	A	T	G	T	A	I	G	P	Y	L	S	I	L	Q	L	G	K	D	L	D	R	F	K	N	L	V	L	V	H	A	A	R	Y	A	A	D	L	S	Y	L	P	L	M	Q	E
Query Conservation
Alig confidence																							.	.	.																												.	.	.																							.	.	.	.
Template Conservation																							.	.	.																												.	.	.																							.	.	.	.
Template Sequence		W	A	K	T	A	Q	V	G	E	L	I	Q	I	G	G	P	G	L	K	K	L	.	.	.	I	N	F	E	A	D	W	F	L	L	A	G	D	X	T	A	L	P	A	I	S	V	N	L	A	K	L	.	.	.	P	N	N	A	V	G	Y	A	V	I	E	V	L	S	E	A	D	I	Q	P	L	V	.	.	.	.
Template Known Secondary structure								T	T														.	.	.			S	S	S	S								G	G	G											S	.	.	.		T	T										S	S	G	G	G						.	.	.	.
Template Predicted Secondary structure																							.	.	.																												.	.	.																							.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		L	E	K	R	Y	E	G	K	L	R	I	Q	T	V	V	S	R	E	T	A	A	G	S	L	T	G	R	I	P	A	L	I	E	S	G	E	L	E	S	T	I	G	L	P	M	N	K	E	T	S	H	V	M	L	C	G	N	P	Q	M	V	R	D	T	Q	Q	L	L	.	K	E	T	R	Q	M	T	K	H	L	R
Query Conservation																																																																						.
Alig confidence		.	.	.	.																				.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation		.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	H	P	E	H	V	E	L	H	W	V	I	N	P	E	A	D	P	E	G	.	.	.	.	.	.	.	.	.	.	R	P	L	V	E	R	I	A	Q	L	P	W	L	A	G	E	P	A	V	W	I	A	C	E	F	N	S	X	R	A	L	R	R	H	F	K	Q	A	H	A	L	P	K	S	H	F	Y
Template Known Secondary structure		.	.	.	.			T										S	S			T	T		.	.	.	.	.	.	.	.	.	.								T	T	S				S	S																												G	G	G
Template Predicted Secondary structure		.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
						156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.											.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		237	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	P	G	H	M	T	A	E	H	Y	W
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	T	S	S	Y	W
Template Known Secondary structure		.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									222	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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